Gm6522 Pseudogene Detail

Summary

• Symbol
  Gm6522
• Name
  predicted gene 6522

• Feature Type
  pseudogene
• IDs
  MGI:3648401
  NCBI Gene: 624696
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:106183060-106206343 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 46.49 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  761 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648401	pseudogene	Chr3:106182516-106207076 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040307	pseudogene	Chr3:104280812-104302451 (+)
AKR/J	MGP_AKRJ_G0040244	pseudogene	Chr3:106852458-106871328 (+)
BALB/cJ	MGP_BALBcJ_G0040307	pseudogene	Chr3:104007404-104025810 (+)
C3H/HeJ	MGP_C3HHeJ_G0039936	pseudogene	Chr3:107192695-107220915 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040908	pseudogene	Chr3:111743717-111771412 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039900	pseudogene	Chr3:115513669-115543318 (+)
DBA/2J	MGP_DBA2J_G0040108	pseudogene	Chr3:103504568-103530447 (+)
FVB/NJ	MGP_FVBNJ_G0040064	pseudogene	Chr3:101439763-101461429 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0040060	pseudogene	Chr3:121601291-121626068 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041005	pseudogene	Chr3:106436582-106454350 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0039255	pseudogene	Chr3:106984605-107007058 (+)

Homology

• Gene Tree
  Gm6522
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm6522
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000106373 (Evidence)
• NCBI Gene
  624696

Representative Sequences			Length	Strain/Species
genomic	624696	NCBI Gene Model | MGI Sequence Detail	23284	C57BL/6J

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426