Gm4873 Pseudogene Detail

Summary

• Symbol
  Gm4873
• Name
  predicted gene 4873

• Feature Type
  pseudogene
• IDs
  MGI:3648522
  NCBI Gene: 232047
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:68191035-68192237 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 31.10 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  276 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648522	pseudogene	Chr6:68187909-68192355 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013530	pseudogene	Chr6:68409313-68410515 (-)
A/J	MGP_AJ_G0013515	pseudogene	Chr6:65444558-65445760 (-)
AKR/J	MGP_AKRJ_G0010893	pseudogene	Chr12:90537310-90538512 (+)
BALB/cJ	MGP_BALBcJ_G0013497	pseudogene	Chr6:65806328-65807530 (-)
C3H/HeJ	MGP_C3HHeJ_G0013440	pseudogene	Chr6:116731259-116732461 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013881	pseudogene	Chr6:70038629-70039831 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013045	pseudogene	Chr6:67991006-67992527 (-)
CBA/J	MGP_CBAJ_G0013312	pseudogene	Chr6:72837125-72838327 (-)
DBA/2J	MGP_DBA2J_G0013395	pseudogene	Chr6:65131184-65132386 (-)
FVB/NJ	MGP_FVBNJ_G0013395	pseudogene	Chr6:64550252-64551454 (-)
LP/J	MGP_LPJ_G0013467	pseudogene	Chr6:68242375-68243577 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013415	pseudogene	Chr6:76619791-76621300 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013875	pseudogene	Chr6:67708282-67709791 (-)
PWK/PhJ	MGP_PWKPhJ_G0012848	pseudogene	Chr6:64104375-64105995 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010563	pseudogene	Chr15:55168066-55169589 (-)
WSB/EiJ	MGP_WSBEiJ_G0013096	pseudogene	Chr6:68032102-68033622 (-)

Homology

• Gene Tree
  Gm4873
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000105163 (Evidence)
• NCBI Gene
  232047

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105163	Ensembl Gene Model | MGI Sequence Detail	1203	C57BL/6J
transcript	ENSMUST00000199402	Ensembl | MGI Sequence Detail	1203	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;