Gm8976 Pseudogene Detail

Summary

• Symbol
  Gm8976
• Name
  predicted gene 8976

• Feature Type
  pseudogene
• IDs
  MGI:3648530
  NCBI Gene: 668097
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:152825146-152825848 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 65.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648530	pseudogene	Chr1:152825104-152825985 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010394	pseudogene	Chr1:157732440-157733142 (-)
A/J	MGP_AJ_G0010384	pseudogene	Chr1:151376593-151377295 (-)
AKR/J	MGP_AKRJ_G0010353	pseudogene	Chr1:156058024-156058726 (-)
BALB/cJ	MGP_BALBcJ_G0010360	pseudogene	Chr1:151951587-151952289 (-)
C3H/HeJ	MGP_C3HHeJ_G0010292	pseudogene	Chr1:156159985-156160687 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010632	pseudogene	Chr1:163181895-163182597 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009314	pseudogene	Chr1:143693087-143693817 (-)
CAST/EiJ	MGP_CASTEiJ_G0010111	pseudogene	Chr1:155671678-155672380 (-)
CBA/J	MGP_CBAJ_G0010261	pseudogene	Chr1:168926511-168927213 (-)
DBA/2J	MGP_DBA2J_G0010294	pseudogene	Chr1:150391675-150392377 (-)
FVB/NJ	MGP_FVBNJ_G0010321	pseudogene	Chr1:148879184-148879886 (-)
LP/J	MGP_LPJ_G0010380	pseudogene	Chr1:158849489-158850191 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010276	pseudogene	Chr1:176571005-176571707 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010596	pseudogene	Chr1:155842180-155842882 (-)
PWK/PhJ	MGP_PWKPhJ_G0010015	pseudogene	Chr1:149415171-149415873 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009827	pseudogene	Chr1:154649100-154649796 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm8976
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm8976
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  2

• Ensembl
  ENSMUSG00000100702 (Evidence)
• NCBI Gene
  668097

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100702	Ensembl Gene Model | MGI Sequence Detail	703	C57BL/6J
transcript	ENSMUST00000187136	Ensembl | MGI Sequence Detail	703	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;