Gm7481 Pseudogene Detail

Summary

• Symbol
  Gm7481
• Name
  predicted gene 7481

• Feature Type
  pseudogene
• IDs
  MGI:3648575
  NCBI Gene: 665077
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:49887540-49888534 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 21.78 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648575	pseudogene	Chr12:49887343-49888552 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010900	pseudogene	Chr12:48567883-48568877 (-)
A/J	MGP_AJ_G0010904	pseudogene	Chr12:46857733-46858727 (-)
AKR/J	MGP_AKRJ_G0010858	pseudogene	Chr12:48240966-48241960 (-)
BALB/cJ	MGP_BALBcJ_G0010880	pseudogene	Chr12:47113687-47114681 (-)
C3H/HeJ	MGP_C3HHeJ_G0010778	pseudogene	Chr12:48347644-48348638 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011152	pseudogene	Chr12:50071696-50072690 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009765	pseudogene	Chr12:45396888-45397841 (-)
CAST/EiJ	MGP_CASTEiJ_G0010607	pseudogene	Chr12:43394784-43395778 (-)
CBA/J	MGP_CBAJ_G0010752	pseudogene	Chr12:51751488-51752482 (-)
DBA/2J	MGP_DBA2J_G0010797	pseudogene	Chr12:46712623-46713617 (-)
FVB/NJ	MGP_FVBNJ_G0010809	pseudogene	Chr12:46185193-46186187 (-)
LP/J	MGP_LPJ_G0010882	pseudogene	Chr12:48583150-48584144 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010791	pseudogene	Chr12:53272447-53273441 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011135	pseudogene	Chr12:47786395-47787389 (-)
PWK/PhJ	MGP_PWKPhJ_G0010497	pseudogene	Chr12:41279148-41280248 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010310	pseudogene	Chr12:42365386-42366377 (-)
WSB/EiJ	MGP_WSBEiJ_G0010656	pseudogene	Chr12:48206511-48207505 (-)

Homology

• Gene Tree
  Gm7481
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098219 (Evidence)
• NCBI Gene
  665077

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098219	Ensembl Gene Model | MGI Sequence Detail	995	C57BL/6J
transcript	ENSMUST00000182020	Ensembl | MGI Sequence Detail	995	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm7481:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr116233	Chr12:49888605-49888607 (-)	-72 bp