Gm5318 Pseudogene Detail

Summary

• Symbol
  Gm5318
• Name
  predicted gene 5318

• Feature Type
  pseudogene
• IDs
  MGI:3648613
  NCBI Gene: 102636284
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:128506283-128506688 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 63.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648613	pseudogene	Chr6:128506253-128506695 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013715	pseudogene	Chr6:132154881-132155286 (-)
A/J	MGP_AJ_G0013702	pseudogene	Chr6:127075512-127075917 (-)
AKR/J	MGP_AKRJ_G0013664	pseudogene	Chr6:130498244-130498649 (-)
BALB/cJ	MGP_BALBcJ_G0013680	pseudogene	Chr6:126650686-126651091 (-)
C3H/HeJ	MGP_C3HHeJ_G0013524	pseudogene	Chr6:130648682-130649087 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014071	pseudogene	Chr6:135586633-135587038 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012052	pseudogene	Chr6:124286560-124286965 (-)
CAST/EiJ	MGP_CASTEiJ_G0013212	pseudogene	Chr6:130942993-130943398 (-)
CBA/J	MGP_CBAJ_G0013495	pseudogene	Chr6:140832118-140832523 (-)
DBA/2J	MGP_DBA2J_G0013576	pseudogene	Chr6:125973819-125974224 (-)
FVB/NJ	MGP_FVBNJ_G0013576	pseudogene	Chr6:124899842-124900247 (-)
LP/J	MGP_LPJ_G0013654	pseudogene	Chr6:132268616-132269021 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013588	pseudogene	Chr6:144647927-144648332 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014061	pseudogene	Chr6:130511074-130511479 (-)
PWK/PhJ	MGP_PWKPhJ_G0013017	pseudogene	Chr6:124269903-124270308 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012798	pseudogene	Chr6:128641387-128641792 (-)
WSB/EiJ	MGP_WSBEiJ_G0013265	pseudogene	Chr6:130914456-130914861 (-)

Homology

• Gene Tree
  Gm5318
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000107764 (Evidence)
• NCBI Gene
  102636284

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107764	Ensembl Gene Model | MGI Sequence Detail	406	C57BL/6J
transcript	ENSMUST00000205249	Ensembl | MGI Sequence Detail	406	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;