Gm6060 Pseudogene Detail

Summary

• Symbol
  Gm6060
• Name
  predicted gene 6060

• Feature Type
  pseudogene
• IDs
  MGI:3648622
  NCBI Gene: 606528
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:15830559-15830935 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 4.88 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648622	pseudogene	Chr1:15830346-15830935 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010006	pseudogene	Chr1:13231190-13231736 (-)
A/J	MGP_AJ_G0009987	pseudogene	Chr1:13099390-13099936 (-)
AKR/J	MGP_AKRJ_G0009970	pseudogene	Chr1:13100187-13100733 (-)
BALB/cJ	MGP_BALBcJ_G0009976	pseudogene	Chr1:12808066-12808612 (-)
C3H/HeJ	MGP_C3HHeJ_G0009907	pseudogene	Chr1:13102254-13102800 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010225	pseudogene	Chr1:13805788-13807133 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009004	pseudogene	Chr1:11563040-11563330 (-)
CAST/EiJ	MGP_CASTEiJ_G0009756	pseudogene	Chr1:13202388-13202933 (-)
CBA/J	MGP_CBAJ_G0009881	pseudogene	Chr1:14130391-14134106 (-)
DBA/2J	MGP_DBA2J_G0009903	pseudogene	Chr1:12697801-12698347 (-)
FVB/NJ	MGP_FVBNJ_G0009929	pseudogene	Chr1:12504180-12504726 (-)
LP/J	MGP_LPJ_G0009997	pseudogene	Chr1:13433224-13433729 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009889	pseudogene	Chr1:14822451-14822997 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010200	pseudogene	Chr1:13044419-13045092 (-)
PWK/PhJ	MGP_PWKPhJ_G0009660	pseudogene	Chr1:12476531-12477193 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0009817	pseudogene	Chr1:13000836-13001382 (-)

Homology

• Gene Tree
  Gm6060
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000101652 (Evidence)
• NCBI Gene
  606528

Representative Sequences			Length	Strain/Species
genomic	606528	NCBI Gene Model | MGI Sequence Detail	377	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;