Rpl10-ps2 Pseudogene Detail

Summary

• Symbol
  Rpl10-ps2
• Name
  ribosomal protein L10, pseudogene 2
• Synonyms
  Gm4892

• Feature Type
  pseudogene
• IDs
  MGI:3648679
  NCBI Gene: 234703
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:107654401-107655045 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 53.37 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  103 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648679	pseudogene	Chr8:107654333-107655086 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0012995	pseudogene	Chr5:19864282-19864862 (-)
AKR/J	MGP_AKRJ_G0012961	pseudogene	Chr5:20627207-20627787 (-)
BALB/cJ	MGP_BALBcJ_G0012974	pseudogene	Chr5:20340361-20340939 (-)
C3H/HeJ	MGP_C3HHeJ_G0012825	pseudogene	Chr5:20716850-20717430 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014521	pseudogene	Chr8:113323428-113325164 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011531	pseudogene	Chr5:17865005-17865590 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0012793	pseudogene	Chr5:22299858-22300438 (-)
DBA/2J	MGP_DBA2J_G0012869	pseudogene	Chr5:20161255-20161833 (-)
FVB/NJ	MGP_FVBNJ_G0012874	pseudogene	Chr5:19559343-19559921 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0012888	pseudogene	Chr5:23504606-23505184 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013334	pseudogene	Chr5:20237353-20237931 (-)
PWK/PhJ	MGP_PWKPhJ_G0012376	pseudogene	Chr5:19188422-19189020 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012595	pseudogene	Chr5:20336028-20336624 (-)

Homology

• Gene Tree
  Rpl10-ps2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000074108 (Evidence)
• NCBI Gene
  234703

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000074108	Ensembl Gene Model | MGI Sequence Detail	645	C57BL/6J
transcript	ENSMUST00000098432	Ensembl | MGI Sequence Detail	645	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;

TSS for Rpl10-ps2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr82777	Chr8:107655077-107655088 (-)	-38 bp