Gm6184 Pseudogene Detail

Summary

• Symbol
  Gm6184
• Name
  predicted gene 6184

• Feature Type
  pseudogene
• IDs
  MGI:3648764
  NCBI Gene: 620837
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:100562591-100563848 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 44.27 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648764	pseudogene	ChrX:100562591-100563851 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014660	pseudogene	ChrX:98036142-98037402 (+)
A/J	MGP_AJ_G0014668	pseudogene	ChrX:98031333-98032593 (+)
AKR/J	MGP_AKRJ_G0014593	pseudogene	ChrX:100858979-100860239 (+)
BALB/cJ	MGP_BALBcJ_G0014616	pseudogene	ChrX:96782769-96784029 (+)
C3H/HeJ	MGP_C3HHeJ_G0014452	pseudogene	ChrX:98442102-98443362 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015100	pseudogene	ChrX:100948580-100949840 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012800	pseudogene	ChrX:95770804-95772075 (+)
CAST/EiJ	MGP_CASTEiJ_G0014076	pseudogene	ChrX:82744867-82746127 (+)
CBA/J	MGP_CBAJ_G0014438	pseudogene	ChrX:104078002-104079259 (+)
DBA/2J	MGP_DBA2J_G0014523	pseudogene	ChrX:97247159-97248419 (+)
FVB/NJ	MGP_FVBNJ_G0014508	pseudogene	ChrX:96626480-96627740 (+)
LP/J	MGP_LPJ_G0014620	pseudogene	ChrX:98991576-98992836 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014546	pseudogene	ChrX:108614847-108616107 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015067	pseudogene	ChrX:97724357-97725617 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0013676	pseudogene	ChrX:83651490-83654389 (+)
WSB/EiJ	MGP_WSBEiJ_G0014156	pseudogene	ChrX:96426986-96428099 (+)

Homology

• Gene Tree
  Gm6184
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000081674 (Evidence)
• NCBI Gene
  620837

Representative Sequences			Length	Strain/Species
genomic	620837	NCBI Gene Model | MGI Sequence Detail	1258	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;