Gm6308 Pseudogene Detail

Summary

• Symbol
  Gm6308
• Name
  predicted gene 6308

• Feature Type
  pseudogene
• IDs
  MGI:3648854
  NCBI Gene: 622297
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:124274822-124275134 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 59.13 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648854	pseudogene	Chr6:124274732-124275717 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013696	pseudogene	Chr6:127556230-127556542 (+)
A/J	MGP_AJ_G0013683	pseudogene	Chr6:122689018-122689364 (+)
AKR/J	MGP_AKRJ_G0011280	pseudogene	Chr17:21832926-21833245 (+)
BALB/cJ	MGP_BALBcJ_G0013640	pseudogene	Chr6:118822275-118822587 (+)
C3H/HeJ	MGP_C3HHeJ_G0011181	pseudogene	Chr17:22199848-22200167 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014028	pseudogene	Chr6:126998800-127001103 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013193	pseudogene	Chr6:126382985-126383257 (+)
CBA/J	MGP_CBAJ_G0011163	pseudogene	Chr17:24155699-24156018 (+)
DBA/2J	MGP_DBA2J_G0011214	pseudogene	Chr17:21401269-21401588 (+)
FVB/NJ	MGP_FVBNJ_G0011215	pseudogene	Chr17:21117358-21117677 (+)
LP/J	MGP_LPJ_G0013615	pseudogene	Chr6:123819790-123825195 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011210	pseudogene	Chr17:23955369-23955688 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014021	pseudogene	Chr6:122303772-122304084 (+)
PWK/PhJ	MGP_PWKPhJ_G0012998	pseudogene	Chr6:119876629-119878008 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012764	pseudogene	Chr6:121045593-121045905 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm6308
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000107600 (Evidence)
• NCBI Gene
  622297

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107600	Ensembl Gene Model | MGI Sequence Detail	313	C57BL/6J
transcript	ENSMUST00000203226	Ensembl | MGI Sequence Detail	313	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;