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Pramel54 Gene Detail
Summary
  • Symbol
    Pramel54
  • Name
    PRAME like 54
  • Synonyms
    Gm7982
  • Feature Type
    protein coding gene
  • IDs
    MGI:3648891
    NCBI Gene: 666209
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:95889873-95894414 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 47.29 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648891
 protein coding gene Chr5:95834265-95894674 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    PRAMEF1, PRAME family member 1
  • Vertebrate Orthologs
    27
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRAMEF1, PRAME family member 1
  • Links
    NCBI Gene ID: 65121
    neXtProt AC: NX_O95521
    UniProt: O95521

  • Chr Location
    1p36.21; chr1:12791397-12796628 (+)  GRCh38
  • Human Ortholog
    PRAMEF10, PRAME family member 10
  • Links
    NCBI Gene ID: 343071
    neXtProt AC: NX_O60809
    UniProt: O60809

  • Chr Location
    1p36.21; chr1:12892896-12898270 (-)  GRCh38
  • Human Ortholog
    PRAMEF11, PRAME family member 11
  • Links
    NCBI Gene ID: 440560
    neXtProt AC: NX_O60813
    UniProt: O60813

  • Chr Location
    1p36.21; chr1:12824605-12831410 (-)  GRCh38
  • Human Ortholog
    PRAMEF12, PRAME family member 12
  • Links
    NCBI Gene ID: 390999
    neXtProt AC: NX_O95522
    UniProt: O95522

  • Chr Location
    1p36.21; chr1:12773738-12777906 (+)  GRCh38
  • Human Ortholog
    PRAMEF13, PRAME family member 13
  • Links
    NCBI Gene ID: 400736
    neXtProt AC: NX_Q5VWM6
    UniProt: Q5VWM6

  • Chr Location
    1p36.21; chr1:13196188-13201409 (-)  GRCh38
  • Human Ortholog
    PRAMEF18, PRAME family member 18
  • Links
    NCBI Gene ID: 391003
    neXtProt AC: NX_Q5VWM3
    UniProt: Q5VWM3

  • Chr Location
    1p36.21; chr1:13222695-13226154 (-)  GRCh38
  • Human Ortholog
    PRAMEF19, PRAME family member 19
  • Links
    NCBI Gene ID: 645414
    neXtProt AC: NX_Q5SWL8
    UniProt: Q5SWL8

  • Chr Location
    1p36.21; chr1:13368431-13371947 (-)  GRCh38
  • Human Ortholog
    PRAMEF2, PRAME family member 2
  • Synonyms
    DJ845O24.3
  • Links
    NCBI Gene ID: 65122
    neXtProt AC: NX_O60811
    UniProt: O60811

  • Chr Location
    1p36.21; chr1:12857086-12861909 (+)  GRCh38
  • Human Ortholog
    PRAMEF20, PRAME family member 20
  • Synonyms
    PRAMEF21
  • Links
    NCBI Gene ID: 645425
    neXtProt AC: NX_Q5VT98
    UniProt: Q5VT98

  • Chr Location
    1p36.21; chr1:13410450-13421328 (+)  GRCh38
  • Human Ortholog
    PRAMEF25, PRAME family member 25
  • Links
    NCBI Gene ID: 441873
    neXtProt AC: NX_A6NGN4
    UniProt: A6NGN4

  • Chr Location
    1p36.21; chr1:13068677-13077884 (+)  GRCh38
  • Human Ortholog
    PRAMEF26, PRAME family member 26
  • Synonyms
    PRAMEF25
  • Links
    NCBI Gene ID: 645359
    neXtProt AC: NX_A6NGN4
    UniProt: H0Y7S4

  • Chr Location
    1p36.21
  • Human Ortholog
    PRAMEF27, PRAME family member 27
  • Links
    NCBI Gene ID: 101929983
    neXtProt AC: NX_A3QJZ7
    UniProt: A3QJZ7

  • Chr Location
    chr1:13049476-13056575 (-)  GRCh38
  • Human Ortholog
    PRAMEF33, PRAME family member 33
  • Synonyms
    PRAMEF33P
  • Links
    NCBI Gene ID: 645382
    neXtProt AC: NX_A0A0G2JMD5
    UniProt: A0A0G2JMD5

  • Chr Location
    1p36.21; chr1:13303539-13308907 (+)  GRCh38
  • Human Ortholog
    PRAMEF4, PRAME family member 4
  • Links
    NCBI Gene ID: 400735
    neXtProt AC: NX_O60810
    UniProt: O60810

  • Chr Location
    1p36.21; chr1:12879212-12886201 (-)  GRCh38
  • Human Ortholog
    PRAMEF5, PRAME family member 5
  • Synonyms
    PRAMEF23, PRAMEF5L
  • Links
    NCBI Gene ID: 343068
    neXtProt AC: NX_Q5TYX0
    UniProt: Q5TYX0

  • Chr Location
    1p36.21; chr1:13254198-13263435 (+)  GRCh38
  • Human Ortholog
    PRAMEF6, PRAME family member 6
  • Links
    NCBI Gene ID: 440561
    neXtProt AC: NX_Q5VXH4
    UniProt: Q5VXH4

  • Chr Location
    1p36.21; chr1:12938472-12947580 (-)  GRCh38
  • Human Ortholog
    PRAMEF7, PRAME family member 7
  • Links
    NCBI Gene ID: 441871
    neXtProt AC: NX_Q5VXH5
    UniProt: Q5VXH5

  • Chr Location
    1p36.21; chr1:12916610-12920751 (+)  GRCh38
  • Human Ortholog
    PRAMEF8, PRAME family member 8
  • Synonyms
    PRAMEF24
  • Links
    NCBI Gene ID: 391002
    neXtProt AC: NX_Q5VWM4
    UniProt: Q5VWM4

  • Chr Location
    1p36.21; chr1:13281304-13285137 (-)  GRCh38
  • Human Ortholog
    PRAMEF9, PRAME family member 9
  • Links
    NCBI Gene ID: 343070
    UniProt: P0DUQ2

  • Chr Location
    1p36.21; chr1:13171848-13179459 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human PRAME associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    3 involving Pramel54
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    13
  • RefSeq
    6
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072814 Ensembl Gene Model | MGI Sequence Detail 4542 C57BL/6J ±  kb
transcript ENSMUST00000136313 Ensembl | MGI Sequence Detail 1528 Not Applicable  
polypeptide ENSMUSP00000114696 Ensembl | MGI Sequence Detail 481 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 5
Other
Accession IDs
less
MGI:7466584
References
more
  • Summaries
    All 13
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory