Gm7977 Pseudogene Detail

Summary

• Symbol
  Gm7977
• Name
  predicted gene 7977

• Feature Type
  pseudogene
• IDs
  MGI:3648898
  NCBI Gene: 666202
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:47980447-47981194 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 21.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648898	pseudogene	Chr3:47980447-47981195 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012130	pseudogene	Chr3:46335645-46336328 (-)
A/J	MGP_AJ_G0012126	pseudogene	Chr3:45096881-45097630 (-)
AKR/J	MGP_AKRJ_G0012087	pseudogene	Chr3:45978499-45979248 (-)
BALB/cJ	MGP_BALBcJ_G0012102	pseudogene	Chr3:44968916-44970140 (-)
C3H/HeJ	MGP_C3HHeJ_G0011979	pseudogene	Chr3:46166314-46167063 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012410	pseudogene	Chr3:48279488-48286514 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011953	pseudogene	Chr3:49741142-49741891 (-)
DBA/2J	MGP_DBA2J_G0012007	pseudogene	Chr3:44752472-44753221 (-)
FVB/NJ	MGP_FVBNJ_G0012014	pseudogene	Chr3:43793063-43794430 (-)
LP/J	MGP_LPJ_G0012078	pseudogene	Chr3:47105559-47106242 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012016	pseudogene	Chr3:53508649-53509398 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012419	pseudogene	Chr3:45854783-45855530 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0011784	pseudogene	Chr3:45999091-45999776 (-)

Homology

• Gene Tree
  Gm7977
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm7977
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000103257 (Evidence)
• NCBI Gene
  666202

Representative Sequences			Length	Strain/Species
genomic	666202	NCBI Gene Model | MGI Sequence Detail	748	C57BL/6J
transcript	NR_040408	RefSeq | MGI Sequence Detail	748	C57BL/6
polypeptide	A8C8N6	UniProt | EBI | MGI Sequence Detail	110	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR023410 14-3-3 domain
  IPR036815 14-3-3 domain superfamily
  IPR000308 14-3-3 protein

References

• Summaries
  All 12

  Diseases 1

  Phenotypes 7
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426