Gm8100 Pseudogene Detail

Summary

• Symbol
  Gm8100
• Name
  predicted gene 8100

• Feature Type
  pseudogene
• IDs
  MGI:3649005
  NCBI Gene: 666430
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:28675868-28676855 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 16.31 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  187 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649005	pseudogene	Chr8:28675850-28677068 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014059	pseudogene	Chr8:26443652-26444639 (+)
A/J	MGP_AJ_G0014078	pseudogene	Chr8:25447497-25448484 (+)
AKR/J	MGP_AKRJ_G0014007	pseudogene	Chr8:26273609-26274596 (+)
BALB/cJ	MGP_BALBcJ_G0014031	pseudogene	Chr8:25567073-25573075 (+)
C3H/HeJ	MGP_C3HHeJ_G0013863	pseudogene	Chr8:26487932-26488919 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014468	pseudogene	Chr8:27481483-27482470 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012306	pseudogene	Chr8:22567804-22568803 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0013845	pseudogene	Chr8:28528181-28531124 (+)
DBA/2J	MGP_DBA2J_G0013923	pseudogene	Chr8:25418498-25419485 (+)
FVB/NJ	MGP_FVBNJ_G0013926	pseudogene	Chr8:25223515-25224502 (+)
LP/J	MGP_LPJ_G0014007	pseudogene	Chr8:26405385-26406995 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013951	pseudogene	Chr8:28013575-28014562 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014442	pseudogene	Chr8:26232822-26233809 (+)
PWK/PhJ	MGP_PWKPhJ_G0013333	pseudogene	Chr8:25001821-25002843 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013111	pseudogene	Chr8:25542722-25543675 (-)
WSB/EiJ	MGP_WSBEiJ_G0013582	pseudogene	Chr8:26403308-26404295 (+)

Homology

• Gene Tree
  Gm8100
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000098056 (Evidence)
• NCBI Gene
  666430

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098056	Ensembl Gene Model | MGI Sequence Detail	988	C57BL/6J
transcript	ENSMUST00000182906	Ensembl | MGI Sequence Detail	988	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;