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Gm5523 Pseudogene Detail
Summary
  • Symbol
    Gm5523
  • Name
    predicted pseudogene 5523
  • Feature Type
    pseudogene
  • IDs
    MGI:3649089
    NCBI Gene: 433273
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:13856107-13857103 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 4.31 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    212 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649089
 pseudogene Chr1:13855909-13857153 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0009986
 pseudogene Chr1:11107546-11108561 (-)
AKR/J MGP_AKRJ_G0009969
 pseudogene Chr1:11060854-11061798 (-)
BALB/cJ MGP_BALBcJ_G0009975
 pseudogene Chr1:10816730-10817732 (-)
C3H/HeJ MGP_C3HHeJ_G0009906
 pseudogene Chr1:11026170-11029189 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010224
 pseudogene Chr1:11683434-11687806 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0009880
 pseudogene Chr1:11943519-11944522 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0009928
 pseudogene Chr1:10532042-10534255 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0009888
 pseudogene Chr1:12658829-12660443 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097711 Ensembl Gene Model | MGI Sequence Detail 997 C57BL/6J ±  kb
transcript ENSMUST00000180415 Ensembl | MGI Sequence Detail 997 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 5
References
more
  • Summaries
    All 5
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory