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Gm12606 Gene Detail
Summary
  • Symbol
    Gm12606
  • Name
    predicted gene 12606
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649222
    NCBI Gene: 100379609
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:89153936-89191640 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 42.15 cM
Strain
Comparison
more
  • SNPs within 2kb
    1060 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649222
 lncRNA gene Chr4:89153936-89191640 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006460
 lincRNA gene Chr4:89184732-89231608 (-)
A/J MGP_AJ_G0006452
 lincRNA gene Chr4:86046307-86089670 (-)
AKR/J MGP_AKRJ_G0006426
 lincRNA gene Chr4:88178735-88219208 (-)
BALB/cJ MGP_BALBcJ_G0006426
 lincRNA gene Chr4:86282278-86326063 (-)
C3H/HeJ MGP_C3HHeJ_G0006376
 lincRNA gene Chr4:88923391-88972744 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006592
 lincRNA gene Chr4:92548915-92596438 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006309
 lincRNA gene Chr4:86758699-86804270 (-)
CBA/J MGP_CBAJ_G0006359
 lincRNA gene Chr4:95434407-95478420 (-)
DBA/2J MGP_DBA2J_G0006381
 lincRNA gene Chr4:85801553-85837027 (-)
FVB/NJ MGP_FVBNJ_G0006403
 lincRNA gene Chr4:84738763-84777032 (-)
LP/J MGP_LPJ_G0006462
 lincRNA gene Chr4:89464608-89505818 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006390
 lincRNA gene Chr4:100403271-100443008 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006596
 lincRNA gene Chr4:88330167-88371344 (-)
PWK/PhJ MGP_PWKPhJ_G0006246
 lincRNA gene Chr4:84097370-84139569 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006158
 lincRNA gene Chr4:85852680-85894137 (-)
WSB/EiJ MGP_WSBEiJ_G0006355
 lincRNA gene Chr4:88535899-88577072 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Gm12606
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    6
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087659 Ensembl Gene Model | MGI Sequence Detail 37705 C57BL/6J ±  kb
transcript ENSMUST00000129527 Ensembl | MGI Sequence Detail 1184 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Developmental Gene Expression 1
    Phenotypes 3
  • Earliest
    J:248399 Mullin NK, et al., Wnt/beta-catenin Signaling Pathway Regulates Specific lncRNAs That Impact Dermal Fibroblasts and Skin Fibrosis. Front Genet. 2017;8:183
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory