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Gm13880 Pseudogene Detail
Summary
  • Symbol
    Gm13880
  • Name
    predicted gene 13880
  • Feature Type
    pseudogene
  • IDs
    MGI:3649539
    NCBI Gene: 433458
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:103649348-103649821 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 54.43 cM
Strain
Comparison
more
  • SNPs within 2kb
    98 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649539
 pseudogene Chr2:103648840-103650012 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011795
 pseudogene Chr2:105816610-105817083 (-)
A/J MGP_AJ_G0011786
 pseudogene Chr2:101449689-101450162 (-)
AKR/J MGP_AKRJ_G0011756
 pseudogene Chr2:104202007-104202480 (-)
BALB/cJ MGP_BALBcJ_G0011764
 pseudogene Chr2:101747016-101747489 (-)
C3H/HeJ MGP_C3HHeJ_G0011652
 pseudogene Chr2:104545441-104545914 (-)
C57BL/6NJ MGP_C57BL6NJ_G0012067
 pseudogene Chr2:109360536-109361009 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0011628
 pseudogene Chr2:113076037-113076510 (-)
DBA/2J MGP_DBA2J_G0011679
 pseudogene Chr2:101015355-101015828 (-)
FVB/NJ MGP_FVBNJ_G0011681
 pseudogene Chr2:100011993-100012466 (-)
LP/J MGP_LPJ_G0011748
 pseudogene Chr2:105948726-105949199 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011686
 pseudogene Chr2:117026053-117026526 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0012061
 pseudogene Chr2:104419040-104419513 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0010664
 pseudogene Chr12:57914937-57933794 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm13880
  • Find Mice (IMSR)
    1 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081010 Ensembl Gene Model | MGI Sequence Detail 474 C57BL/6J ±  kb
transcript ENSMUST00000118421 Ensembl | MGI Sequence Detail 474 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory