Gm14261 Gene Detail

Summary

• Symbol
  Gm14261
• Name
  predicted gene 14261

• Feature Type
  lncRNA gene
• IDs
  MGI:3649583
  NCBI Gene: 105244370
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr2:168608063-168610030 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 88.99 cM

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649583	lncRNA gene	Chr2:168608059-168610032 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015492	unclassified non-coding RNA gene	Chr2:174657442-174659408 (+)
A/J	MGP_AJ_G0015469	unclassified non-coding RNA gene	Chr2:167411671-167413637 (+)
AKR/J	MGP_AKRJ_G0015433	unclassified non-coding RNA gene	Chr2:172415419-172417385 (+)
BALB/cJ	MGP_BALBcJ_G0015432	unclassified non-coding RNA gene	Chr2:167771191-167773157 (+)
C3H/HeJ	MGP_C3HHeJ_G0015255	unclassified non-coding RNA gene	Chr2:172782371-172784337 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015886	unclassified non-coding RNA gene	Chr2:179736688-179738653 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013624	unclassified non-coding RNA gene	Chr2:160714108-160716071 (+)
CAST/EiJ	MGP_CASTEiJ_G0014807	unclassified non-coding RNA gene	Chr2:173284519-173286484 (+)
CBA/J	MGP_CBAJ_G0015236	unclassified non-coding RNA gene	Chr2:186350385-186352351 (+)
DBA/2J	MGP_DBA2J_G0015330	unclassified non-coding RNA gene	Chr2:166511022-166512988 (+)
FVB/NJ	MGP_FVBNJ_G0015337	unclassified non-coding RNA gene	Chr2:165086626-165088592 (+)
LP/J	MGP_LPJ_G0015408	unclassified non-coding RNA gene	Chr2:174649678-174651644 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015361	unclassified non-coding RNA gene	Chr2:189615604-189617570 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015926	unclassified non-coding RNA gene	Chr2:172340891-172342856 (+)
PWK/PhJ	MGP_PWKPhJ_G0014595	unclassified non-coding RNA gene	Chr2:166203332-166205296 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014383	unclassified non-coding RNA gene	Chr2:171316711-171318675 (+)
WSB/EiJ	MGP_WSBEiJ_G0014914	unclassified non-coding RNA gene	Chr2:173265078-173267043 (+)

Homology

• Gene Tree
  Gm14261
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  8
• Gene trapped
  8
• Find Mice (IMSR)
  3 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000085322 (Evidence)
• NCBI Gene
  105244370

Representative Sequences			Length	Strain/Species
genomic	105244370	NCBI Gene Model | MGI Sequence Detail	1968	C57BL/6J
transcript	NR_166178	RefSeq | MGI Sequence Detail	1431	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 11

  Phenotypes 4
• Earliest
  J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm14261:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr21880	Chr2:168608061-168608067 (+)	1 bp
Tssr21881	Chr2:168608464-168608470 (+)	404 bp