Gm14274 Pseudogene Detail

Summary

• Symbol
  Gm14274
• Name
  predicted gene 14274

• Feature Type
  pseudogene
• IDs
  MGI:3649603
  NCBI Gene: 100418448
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr2:171942541-171943155 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 94.76 cM

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649603	pseudogene	Chr2:171942461-171943233 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011979	pseudogene	Chr2:178250965-178251579 (+)
A/J	MGP_AJ_G0011973	pseudogene	Chr2:170788536-170789150 (+)
AKR/J	MGP_AKRJ_G0011936	pseudogene	Chr2:175934636-175935250 (+)
BALB/cJ	MGP_BALBcJ_G0011952	pseudogene	Chr2:171178631-171179245 (+)
C3H/HeJ	MGP_C3HHeJ_G0011829	pseudogene	Chr2:176282412-176283026 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012245	pseudogene	Chr2:183388660-183389274 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011611	pseudogene	Chr2:176945573-176946187 (+)
CBA/J	MGP_CBAJ_G0011802	pseudogene	Chr2:190231890-190232504 (+)
DBA/2J	MGP_DBA2J_G0011855	pseudogene	Chr2:169884538-169885152 (+)
FVB/NJ	MGP_FVBNJ_G0011862	pseudogene	Chr2:168475483-168476097 (+)
LP/J	MGP_LPJ_G0011923	pseudogene	Chr2:178177231-178177845 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011863	pseudogene	Chr2:193251251-193251865 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012250	pseudogene	Chr2:175897893-175898507 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0011275	pseudogene	Chr2:174905584-174906206 (+)
WSB/EiJ	MGP_WSBEiJ_G0011632	pseudogene	Chr2:176867526-176868140 (+)

Homology

• Gene Tree
  Gm14274
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000083793 (Evidence)
• NCBI Gene
  100418448

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083793	Ensembl Gene Model | MGI Sequence Detail	615	C57BL/6J
transcript	ENSMUST00000117182	Ensembl | MGI Sequence Detail	615	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm14274:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr777	Chr2:171942459-171942469 (+)	-77 bp
Tssr21940	Chr2:171942531-171942547 (+)	-2 bp