Glo1-ps Pseudogene Detail

Summary

• Symbol
  Glo1-ps
• Name
  glyoxalase 1, pseudogene
• Synonyms
  Gm13443

• Feature Type
  pseudogene
• IDs
  MGI:3649615
  NCBI Gene: 654354
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:35230421-35230975 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 23.55 cM

Strain
Comparison

• SNPs within 2kb
  10 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649615	pseudogene	Chr2:35230350-35230999 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011586	pseudogene	Chr2:33973097-33973654 (+)
A/J	MGP_AJ_G0011584	pseudogene	Chr2:32536344-32536898 (+)
AKR/J	MGP_AKRJ_G0011549	pseudogene	Chr2:33677683-33678160 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0011450	pseudogene	Chr2:33569887-33570513 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011857	pseudogene	Chr2:34951308-34951862 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011422	pseudogene	Chr2:36293079-36293558 (+)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0011479	pseudogene	Chr2:32198929-32199403 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0011848	pseudogene	Chr2:33564805-33565359 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Glo1-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  1

• Ensembl
  ENSMUSG00000075391 (Evidence)
• NCBI Gene
  654354

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000075391	Ensembl Gene Model | MGI Sequence Detail	555	C57BL/6J
transcript	ENSMUST00000120770	Ensembl | MGI Sequence Detail	555	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Glo1-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr17469	Chr2:35230349-35230378 (+)	-57 bp