Gm14024 Gene Detail

Summary

• Symbol
  Gm14024
• Name
  predicted gene 14024

• Feature Type
  lncRNA gene
• IDs
  MGI:3649704
  NCBI Gene: 671466
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:129088296-129110446 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 62.84 cM

Strain
Comparison

• SNPs within 2kb
  742 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649704	lncRNA gene	Chr2:129088296-129110446 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003635	antisense lncRNA gene	Chr2:132625288-132646937 (+)
A/J	MGP_AJ_G0003617	antisense lncRNA gene	Chr2:127252778-127275319 (+)
AKR/J	MGP_AKRJ_G0003595	antisense lncRNA gene	Chr2:130867560-130889104 (+)
BALB/cJ	MGP_BALBcJ_G0003606	antisense lncRNA gene	Chr2:127519127-127540942 (+)
C3H/HeJ	MGP_C3HHeJ_G0003553	antisense lncRNA gene	Chr2:131383462-131404979 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003745	antisense lncRNA gene	Chr2:136777968-136800338 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003253	antisense lncRNA gene	Chr2:122075602-122098330 (+)
CAST/EiJ	MGP_CASTEiJ_G0003516	antisense lncRNA gene	Chr2:131634949-131656099 (+)
CBA/J	MGP_CBAJ_G0003550	antisense lncRNA gene	Chr2:141835141-141859334 (+)
DBA/2J	MGP_DBA2J_G0003558	antisense lncRNA gene	Chr2:126645623-126666815 (+)
FVB/NJ	MGP_FVBNJ_G0003578	antisense lncRNA gene	Chr2:125291307-125313251 (+)
LP/J	MGP_LPJ_G0003635	antisense lncRNA gene	Chr2:132870451-132891938 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003566	antisense lncRNA gene	Chr2:145733667-145755234 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003746	antisense lncRNA gene	Chr2:130902166-130925077 (+)
PWK/PhJ	MGP_PWKPhJ_G0003471	antisense lncRNA gene	Chr2:126228213-126250288 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003414	antisense lncRNA gene	Chr2:130023929-130048056 (+)
WSB/EiJ	MGP_WSBEiJ_G0003550	antisense lncRNA gene	Chr2:131824937-131846444 (+)

Homology

• Gene Tree
  Gm14024
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  8
• Chemically induced (other)
  1
• Gene trapped
  6
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm14024
• Find Mice (IMSR)
  20 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085485 (Evidence)
• NCBI Gene
  671466

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085485	Ensembl Gene Model | MGI Sequence Detail	22151	C57BL/6J
transcript	ENSMUST00000141964	Ensembl | MGI Sequence Detail	560	Not Applicable

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm14024:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20109	Chr2:129088277-129088281 (+)	-17 bp