Gm11957 Pseudogene Detail

Summary

• Symbol
  Gm11957
• Name
  predicted gene 11957
• Synonyms
  EG625729

• Feature Type
  pseudogene
• IDs
  MGI:3649800
  NCBI Gene: 625729
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:4079372-4080150 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 2.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649800	pseudogene	Chr11:4078395-4080172 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0010800	pseudogene	Chr11:1141322-1143133 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011115	pseudogene	Chr3:143582865-143583735 (-)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0010778	pseudogene	Chr11:1127672-1130729 (-)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0009993	pseudogene	Chr11:1073351-1082660 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm11957
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  9
• RefSeq
  1

• Ensembl
  ENSMUSG00000083838 (Evidence)
• NCBI Gene
  625729

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083838	Ensembl Gene Model | MGI Sequence Detail	779	C57BL/6J
transcript	ENSMUST00000118304	Ensembl | MGI Sequence Detail	779	Not Applicable

Other
Accession IDs

MGI:3644220

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;