Gm12057 Pseudogene Detail

Summary

• Symbol
  Gm12057
• Name
  predicted gene 12057
• Synonyms
  Gm4063

• Feature Type
  pseudogene
• IDs
  MGI:3650030
  NCBI Gene: 100042846
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:22708599-22710025 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 14.21 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650030	pseudogene	Chr11:22708399-22710042 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010629	pseudogene	Chr11:20457020-20458446 (-)
A/J	MGP_AJ_G0010624	pseudogene	Chr11:19681505-19682931 (-)
AKR/J	MGP_AKRJ_G0010585	pseudogene	Chr11:20379753-20381179 (-)
BALB/cJ	MGP_BALBcJ_G0010599	pseudogene	Chr11:19815912-19817338 (-)
C3H/HeJ	MGP_C3HHeJ_G0010517	pseudogene	Chr11:20261111-20262537 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010873	pseudogene	Chr11:21315648-21317074 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009520	pseudogene	Chr11:18579254-18580854 (-)
CAST/EiJ	MGP_CASTEiJ_G0010343	pseudogene	Chr11:20322400-20323832 (-)
CBA/J	MGP_CBAJ_G0010489	pseudogene	Chr11:22252563-22253989 (-)
DBA/2J	MGP_DBA2J_G0010524	pseudogene	Chr11:19610700-19612126 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0010610	pseudogene	Chr11:20583698-20585124 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0010848	pseudogene	Chr11:20504632-20506058 (-)
PWK/PhJ	MGP_PWKPhJ_G0010237	pseudogene	Chr11:19645584-19647015 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010049	pseudogene	Chr11:20241959-20243381 (-)
WSB/EiJ	MGP_WSBEiJ_G0010397	pseudogene	Chr11:20122196-20123622 (-)

Homology

• Gene Tree
  Gm12057
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12057
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000084081 (Evidence)
• NCBI Gene
  100042846

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084081	Ensembl Gene Model | MGI Sequence Detail	1427	C57BL/6J
transcript	ENSMUST00000117244	Ensembl | MGI Sequence Detail	1427	Not Applicable

Other
Accession IDs

MGI:3782238

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6