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Gm11820 Gene Detail
Summary
  • Symbol
    Gm11820
  • Name
    predicted gene 11820
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650049
    NCBI Gene: 102640073
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:13091351-13108752 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 5.58 cM
Strain
Comparison
more
  • SNPs within 2kb
    550 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650049
 lncRNA gene Chr4:13076140-13108752 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006389
 lincRNA gene Chr4:9810027-9832474 (+)
A/J MGP_AJ_G0006381
 lincRNA gene Chr4:9634849-9656180 (+)
AKR/J MGP_AKRJ_G0006356
 lincRNA gene Chr4:9755314-9777007 (+)
BALB/cJ MGP_BALBcJ_G0006355
 lincRNA gene Chr4:9554078-9574715 (+)
C3H/HeJ MGP_C3HHeJ_G0006305
 lincRNA gene Chr4:9913688-9936380 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006522
 lincRNA gene Chr4:10254612-10281623 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005812
 lincRNA gene Chr4:9028678-9051701 (+)
CAST/EiJ MGP_CASTEiJ_G0006240
 lincRNA gene Chr4:9706486-9726711 (+)
CBA/J MGP_CBAJ_G0006289
 lincRNA gene Chr4:10494608-10516114 (+)
DBA/2J MGP_DBA2J_G0006310
 lincRNA gene Chr4:9484838-9505887 (+)
FVB/NJ MGP_FVBNJ_G0006333
 lincRNA gene Chr4:9273384-9293997 (+)
LP/J MGP_LPJ_G0006393
 lincRNA gene Chr4:9917796-9939606 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006323
 lincRNA gene Chr4:10784600-10808981 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006526
 lincRNA gene Chr4:9740538-9760749 (+)
PWK/PhJ MGP_PWKPhJ_G0006176
 lincRNA gene Chr4:9486102-9508938 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006089
 lincRNA gene Chr4:9699311-9719752 (+)
WSB/EiJ MGP_WSBEiJ_G0006285
 lincRNA gene Chr4:9804787-9827242 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 102640073 NCBI Gene Model | MGI Sequence Detail 17402 C57BL/6J ±  kb
transcript AK139819 GenBank | ENA | DDBJ | MGI Sequence Detail 2490 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 7
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory