Gm11973 MGI Mouse Gene Detail - MGI:3650058

Sequence Map

Chr11:6425425-6443535 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650058	lncRNA gene	Chr11:6425425-6443535 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002917	antisense lncRNA gene	Chr11:3598060-3617248 (+)
A/J	MGP_AJ_G0002894	antisense lncRNA gene	Chr11:3440909-3458486 (+)
AKR/J	MGP_AKRJ_G0002875	antisense lncRNA gene	Chr11:3612684-3633197 (+)
BALB/cJ	MGP_BALBcJ_G0002882	antisense lncRNA gene	Chr11:3449887-3468610 (+)
C3H/HeJ	MGP_C3HHeJ_G0002837	antisense lncRNA gene	Chr11:3485529-3507645 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003024	antisense lncRNA gene	Chr11:3698631-3720923 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002566	antisense lncRNA gene	Chr11:3326142-3342485 (+)
CAST/EiJ	MGP_CASTEiJ_G0002809	antisense lncRNA gene	Chr11:3482318-3505785 (+)
CBA/J	MGP_CBAJ_G0002834	antisense lncRNA gene	Chr11:4119343-4144968 (+)
DBA/2J	MGP_DBA2J_G0002841	antisense lncRNA gene	Chr11:3355792-3374343 (+)
FVB/NJ	MGP_FVBNJ_G0002860	antisense lncRNA gene	Chr11:3374554-3392312 (+)
LP/J	MGP_LPJ_G0002916	antisense lncRNA gene	Chr11:3669958-3690796 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002848	antisense lncRNA gene	Chr11:3656671-3674218 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003027	antisense lncRNA gene	Chr11:3636946-3659341 (+)
PWK/PhJ	MGP_PWKPhJ_G0002767	antisense lncRNA gene	Chr11:3390056-3408254 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002716	antisense lncRNA gene	Chr11:3574657-3595746 (+)
WSB/EiJ	MGP_WSBEiJ_G0002838	antisense lncRNA gene	Chr11:3453371-3472851 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000086839	Ensembl Gene Model \| MGI Sequence Detail	18111	C57BL/6J	± kb
	transcript	ENSMUST00000155498	Ensembl \| MGI Sequence Detail	867	Not Applicable

Summaries

All 8

Phenotypes 3
Earliest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Latest

J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm11973:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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