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Gm11946 Gene Detail
Summary
  • Symbol
    Gm11946
  • Name
    predicted gene 11946
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650071
    NCBI Gene: 102637250
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:3480157-3486856 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 11, 2.48 cM
Strain
Comparison
more
  • SNPs within 2kb
    182 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650071
lncRNA gene Chr11:3480157-3496570 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015148
unclassified non-coding RNA gene Chr11:404377-411070 (+)
A/J MGP_AJ_G0015122
unclassified non-coding RNA gene Chr11:447745-454444 (+)
AKR/J MGP_AKRJ_G0015085
unclassified non-coding RNA gene Chr11:465632-472331 (+)
BALB/cJ MGP_BALBcJ_G0015085
unclassified non-coding RNA gene Chr11:420702-427401 (+)
C3H/HeJ MGP_C3HHeJ_G0014908
unclassified non-coding RNA gene Chr11:403996-410695 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015541
unclassified non-coding RNA gene Chr11:478374-485073 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013287
unclassified non-coding RNA gene Chr11:357013-363681 (+)
CAST/EiJ MGP_CASTEiJ_G0014462
unclassified non-coding RNA gene Chr11:358416-365201 (+)
CBA/J MGP_CBAJ_G0014887
unclassified non-coding RNA gene Chr11:641433-648132 (+)
DBA/2J MGP_DBA2J_G0014980
unclassified non-coding RNA gene Chr11:366343-373042 (+)
FVB/NJ MGP_FVBNJ_G0014991
unclassified non-coding RNA gene Chr11:398050-404753 (+)
LP/J MGP_LPJ_G0015062
unclassified non-coding RNA gene Chr11:502155-508854 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015018
unclassified non-coding RNA gene Chr11:387305-394004 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015580
unclassified non-coding RNA gene Chr11:478893-485592 (+)
PWK/PhJ MGP_PWKPhJ_G0014254
unclassified non-coding RNA gene Chr11:341731-348451 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014042
unclassified non-coding RNA gene Chr11:432623-439213 (+)
WSB/EiJ MGP_WSBEiJ_G0014565
unclassified non-coding RNA gene Chr11:354371-361070 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087291 Ensembl Gene Model | MGI Sequence Detail 6700 C57BL/6J ±  kb
transcript ENSMUST00000123459 Ensembl | MGI Sequence Detail 3941 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 9
    Phenotypes 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory