Gm12445 Pseudogene Detail

Summary

• Symbol
  Gm12445
• Name
  predicted gene 12445

• Feature Type
  pseudogene
• IDs
  MGI:3650256
  NCBI Gene: 666379
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:46273819-46274840 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 24.60 cM

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650256	pseudogene	Chr4:46273819-46274936 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012634	pseudogene	Chr4:44563498-44564427 (-)
A/J	MGP_AJ_G0012624	pseudogene	Chr4:42945413-42946351 (-)
AKR/J	MGP_AKRJ_G0012593	pseudogene	Chr4:43994965-43997589 (-)
BALB/cJ	MGP_BALBcJ_G0012609	pseudogene	Chr4:43042804-43043727 (-)
C3H/HeJ	MGP_C3HHeJ_G0012470	pseudogene	Chr4:44596328-44598056 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012928	pseudogene	Chr4:46215900-46216879 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011246	pseudogene	Chr4:40325188-40326113 (-)
CAST/EiJ	MGP_CASTEiJ_G0012226	pseudogene	Chr4:44135561-44138463 (-)
CBA/J	MGP_CBAJ_G0012450	pseudogene	Chr4:47683105-47684022 (-)
DBA/2J	MGP_DBA2J_G0012507	pseudogene	Chr4:42838043-42838969 (-)
FVB/NJ	MGP_FVBNJ_G0012507	pseudogene	Chr4:42084031-42085025 (-)
LP/J	MGP_LPJ_G0012576	pseudogene	Chr4:44620677-44623414 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012513	pseudogene	Chr4:50769724-50770736 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012929	pseudogene	Chr4:44201875-44204089 (-)
PWK/PhJ	MGP_PWKPhJ_G0012056	pseudogene	Chr4:42930188-42931447 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011870	pseudogene	Chr4:43701767-43702813 (-)
WSB/EiJ	MGP_WSBEiJ_G0012248	pseudogene	Chr4:44108931-44111645 (-)

Homology

• Gene Tree
  Gm12445
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000081483 (Evidence)
• NCBI Gene
  666379

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081483	Ensembl Gene Model | MGI Sequence Detail	1022	C57BL/6J
transcript	ENSMUST00000117947	Ensembl | MGI Sequence Detail	885	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;