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Gm11816 Gene Detail
Summary
  • Symbol
    Gm11816
  • Name
    predicted gene 11816
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650294
    NCBI Gene: 102638175
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:9282706-9287391 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 4.09 cM
Strain
Comparison
more
  • SNPs within 2kb
    279 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650294
 lncRNA gene Chr4:9279258-9287391 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003871
 antisense lncRNA gene Chr4:5908928-5912302 (-)
A/J MGP_AJ_G0003851
 antisense lncRNA gene Chr4:5759902-5763453 (-)
AKR/J MGP_AKRJ_G0003828
 antisense lncRNA gene Chr4:5835162-5838552 (-)
BALB/cJ MGP_BALBcJ_G0003838
 antisense lncRNA gene Chr4:5747686-5751062 (-)
C3H/HeJ MGP_C3HHeJ_G0003783
 antisense lncRNA gene Chr4:6011556-6014944 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003982
 antisense lncRNA gene Chr4:6231749-6235151 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003481
 antisense lncRNA gene Chr4:5442869-5446315 (-)
CAST/EiJ MGP_CASTEiJ_G0003749
 antisense lncRNA gene Chr4:5852259-5855629 (-)
CBA/J MGP_CBAJ_G0003777
 antisense lncRNA gene Chr4:6318817-6322181 (-)
DBA/2J MGP_DBA2J_G0003792
 antisense lncRNA gene Chr4:5730414-5733790 (-)
FVB/NJ MGP_FVBNJ_G0003812
 antisense lncRNA gene Chr4:5611680-5615084 (-)
LP/J MGP_LPJ_G0003873
 antisense lncRNA gene Chr4:5931046-5934436 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003800
 antisense lncRNA gene Chr4:6524377-6527816 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003981
 antisense lncRNA gene Chr4:5824854-5828244 (-)
PWK/PhJ MGP_PWKPhJ_G0003705
 antisense lncRNA gene Chr4:5745051-5748442 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003650
 antisense lncRNA gene Chr4:5789558-5793021 (-)
WSB/EiJ MGP_WSBEiJ_G0003785
 antisense lncRNA gene Chr4:5949272-5952675 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    5
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086233 Ensembl Gene Model | MGI Sequence Detail 4686 C57BL/6J ±  kb
transcript ENSMUST00000149848 Ensembl | MGI Sequence Detail 1980 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory