Gm11950 Pseudogene Detail

Summary

• Symbol
  Gm11950
• Name
  predicted gene 11950

• Feature Type
  pseudogene
• IDs
  MGI:3650313
  NCBI Gene: 625608
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:3578824-3579661 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 2.55 cM

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650313	pseudogene	Chr11:3578824-3579661 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010559	pseudogene	Chr11:513744-514581 (+)
A/J	MGP_AJ_G0010552	pseudogene	Chr11:551868-552705 (+)
AKR/J	MGP_AKRJ_G0010512	pseudogene	Chr11:572006-572843 (+)
BALB/cJ	MGP_BALBcJ_G0010526	pseudogene	Chr11:519081-519918 (+)
C3H/HeJ	MGP_C3HHeJ_G0010449	pseudogene	Chr11:505066-505903 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010794	pseudogene	Chr11:589165-590002 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009792	pseudogene	Chr12:81305936-81306771 (-)
CAST/EiJ	MGP_CASTEiJ_G0010275	pseudogene	Chr11:471080-471917 (+)
CBA/J	MGP_CBAJ_G0010421	pseudogene	Chr11:761832-762669 (+)
DBA/2J	MGP_DBA2J_G0010451	pseudogene	Chr11:466718-467555 (+)
FVB/NJ	MGP_FVBNJ_G0010469	pseudogene	Chr11:497092-497929 (+)
LP/J	MGP_LPJ_G0010541	pseudogene	Chr11:605425-606262 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010445	pseudogene	Chr11:510688-511525 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010773	pseudogene	Chr11:587704-588541 (+)
PWK/PhJ	MGP_PWKPhJ_G0010175	pseudogene	Chr11:454019-454855 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009989	pseudogene	Chr11:543719-544558 (+)
WSB/EiJ	MGP_WSBEiJ_G0010336	pseudogene	Chr11:463954-464791 (+)

Homology

• Gene Tree
  Gm11950
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084310 (Evidence)
• NCBI Gene
  625608

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084310	Ensembl Gene Model | MGI Sequence Detail	838	C57BL/6J
transcript	ENSMUST00000121615	Ensembl | MGI Sequence Detail	838	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;