Krtap16-1 MGI Mouse Gene Detail - MGI:3650326 - keratin associated protein 16-1

Symbol

Krtap16-1
Name

keratin associated protein 16-1
Synonyms

AI450886

Feature Type

protein coding gene
IDs

MGI:3650326
NCBI Gene: 100504183
Alliance

gene page
Transcription Start Sites

1 TSS

Sequence Map

Chr11:99875536-99877423 bp, - strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 11, 63.33 cM
Mapping Data

1 experiment

SNPs within 2kb

142 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650326	protein coding gene	Chr11:99875529-99877423 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0019132	protein coding gene	Chr11:102720214-102722101 (-)
A/J	MGP_AJ_G0019100	protein coding gene	Chr11:98390153-98392040 (-)
AKR/J	MGP_AKRJ_G0019069	protein coding gene	Chr11:101427692-101429579 (-)
BALB/cJ	MGP_BALBcJ_G0019074	protein coding gene	Chr11:98905804-98907691 (-)
C3H/HeJ	MGP_C3HHeJ_G0018883	protein coding gene	Chr11:101625679-101627566 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0019523	protein coding gene	Chr11:105867254-105869141 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0017150	protein coding gene	Chr11:95842500-95844387 (-)
CAST/EiJ	MGP_CASTEiJ_G0018437	protein coding gene	Chr11:102595943-102597830 (-)
CBA/J	MGP_CBAJ_G0018852	protein coding gene	Chr11:110316537-110318424 (-)
DBA/2J	MGP_DBA2J_G0018965	protein coding gene	Chr11:97954973-97956860 (-)
FVB/NJ	MGP_FVBNJ_G0018954	protein coding gene	Chr11:97462309-97464196 (-)
LP/J	MGP_LPJ_G0019034	protein coding gene	Chr11:103247181-103249068 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0018985	protein coding gene	Chr11:109944666-109946553 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0019561	protein coding gene	Chr11:101802745-101804632 (-)
PWK/PhJ	MGP_PWKPhJ_G0018203	protein coding gene	Chr11:98992457-98994344 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0017992	protein coding gene	Chr11:101496392-101498279 (-)
WSB/EiJ	MGP_WSBEiJ_G0018487	protein coding gene	Chr11:101771008-101772895 (-)

Human Ortholog

KRTAP16-1, keratin associated protein 16-1

Vertebrate Orthologs

2

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

KRTAP16-1, keratin associated protein 16-1
Synonyms

KAP16.1
Links

HGNC:18916

NCBI Gene ID: 100505753

neXtProt AC: NX_A8MUX0

UniProt: A8MUX0
Chr Location

17

MGI Vertebrate Homology

Krtap16-1 stringent orthology
1 human;1 mouse;1 rat
HCOP

vertebrate homology predictions: KRTAP16-1
Gene Tree

Krtap16-1

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Phenotype Summary

8 phenotype references

All Mutations and Alleles

3
Targeted

3
Genomic Mutations

2 involving Krtap16-1
Incidental Mutations

Mutagenetix , APF , CvDC
Find Mice (IMSR)

26 strains or lines available

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All GO Annotations

2
GO References

2

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706
cDNA Data

6

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

27
RefSeq

2
UniProt

1
CCDS

CCDS56804.1

Ensembl

ENSMUSG00000078253 (Evidence)
NCBI Gene

100504183

			Length	Strain/Species	Flank
genomic	ENSMUSG00000078253	Ensembl Gene Model \| MGI Sequence Detail	1888	C57BL/6J	± kb
transcript	ENSMUST00000105050	Ensembl \| MGI Sequence Detail	1888	Not Applicable
polypeptide	ENSMUSP00000100671	Ensembl \| MGI Sequence Detail	502	Not Applicable

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UniProt

1 Sequence
Protein Ontology

PR:000032562 keratin-associated protein 16-1

(term hierarchy)
InterPro Domains

IPR002494 Keratin-associated protein

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All nucleic 6

cDNA 6

Microarray probesets 1

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MGI:2144171

Summaries

All 26

Gene Ontology 2

Phenotypes 8
Earliest

J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
Latest

J:230728 Kumar V, et al., A keratin scaffold regulates epidermal barrier formation, mitochondrial lipid composition, and activity. J Cell Biol. 2015 Dec 7;211(5):1057-75

TSS for Krtap16-1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr110720	Chr11:99877432-99877434 (-)	-10 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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