Krtap9-5 MGI Mouse Gene Detail - MGI:3650333 - keratin associated protein 9-5

Symbol

Krtap9-5
Name

keratin associated protein 9-5
Synonyms

OTTMUSG00000002205

Feature Type

protein coding gene
IDs

MGI:3650333
NCBI Gene: 435286
Alliance

gene page
Transcription Start Sites

1 TSS

Sequence Map

Chr11:99839301-99840377 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 11, 63.29 cM

SNPs within 2kb

67 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650333	protein coding gene	Chr11:99839250-99840377 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0019130	protein coding gene	Chr11:102676371-102677447 (+)
A/J	MGP_AJ_G0019098	protein coding gene	Chr11:98347139-98348215 (+)
AKR/J	MGP_AKRJ_G0019067	protein coding gene	Chr11:101384394-101385470 (+)
BALB/cJ	MGP_BALBcJ_G0019072	protein coding gene	Chr11:98862294-98863442 (+)
C3H/HeJ	MGP_C3HHeJ_G0018881	protein coding gene	Chr11:101588300-101589376 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0019521	protein coding gene	Chr11:105826196-105827272 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0017148	protein coding gene	Chr11:95808009-95809031 (+)
CAST/EiJ	MGP_CASTEiJ_G0018435	protein coding gene	Chr11:102550437-102552637 (+)
CBA/J	MGP_CBAJ_G0018850	protein coding gene	Chr11:110271790-110272866 (+)
DBA/2J	MGP_DBA2J_G0018963	protein coding gene	Chr11:97918248-97919324 (+)
FVB/NJ	MGP_FVBNJ_G0018952	protein coding gene	Chr11:97426104-97427180 (+)
LP/J	MGP_LPJ_G0019032	protein coding gene	Chr11:103196283-103197359 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0018983	protein coding gene	Chr11:109903198-109904274 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0019559	protein coding gene	Chr11:101761110-101762186 (+)
PWK/PhJ	MGP_PWKPhJ_G0018201	protein coding gene	Chr11:98950409-98951485 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0017990	protein coding gene	Chr11:101454446-101457048 (+)
WSB/EiJ	MGP_WSBEiJ_G0018485	protein coding gene	Chr11:101733517-101734665 (+)

Human Ortholog

KRTAP9-1, keratin associated protein 9-1

Vertebrate Orthologs

1

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

KRTAP9-1, keratin associated protein 9-1
Synonyms

KAP9.1, KRTAP9L3
Links

HGNC:18912

NCBI Gene ID: 728318

neXtProt AC: NX_A8MXZ3

UniProt: A8MXZ3
Chr Location

17q21.2; chr17:41189887-41190639 (+) GRCh38

MGI Vertebrate Homology

Krtap9-5 stringent orthology
1 human;1 mouse
HCOP

vertebrate homology predictions: KRTAP9-1
Gene Tree

Krtap9-5

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Phenotype Summary

7 phenotypes from 1 allele in 1 genetic background
11 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

5
Endonuclease-mediated

3
Targeted

2
Genomic Mutations

2 involving Krtap9-5
Incidental Mutations

Mutagenetix , APF
Find Mice (IMSR)

14 strains or lines available
Comparison Matrix

Gene Expression + Phenotype

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Other Mouse Links

GEO

Expression Atlas

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All Sequences

25
RefSeq

2
UniProt

1
CCDS

CCDS48926.1

Ensembl

ENSMUSG00000078255 (Evidence)
NCBI Gene

435286

			Length	Strain/Species	Flank
genomic	ENSMUSG00000078255	Ensembl Gene Model \| MGI Sequence Detail	1077	C57BL/6J	± kb
transcript	ENSMUST00000105052	Ensembl \| MGI Sequence Detail	1077	Not Applicable
polypeptide	ENSMUSP00000100673	Ensembl \| MGI Sequence Detail	358	Not Applicable

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UniProt

1 Sequence
InterPro Domains

IPR002494 Keratin-associated protein

Summaries

All 20

Phenotypes 11
Earliest

J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
Latest

J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

TSS for Krtap9-5:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr104893	Chr11:99839246-99839255 (+)	-50 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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