Uqcrh-ps2 Pseudogene Detail

Summary

• Symbol
  Uqcrh-ps2
• Name
  ubiquinol-cytochrome c reductase hinge protein, pseudogene 2
• Synonyms
  Gm14088

• Feature Type
  pseudogene
• IDs
  MGI:3650492
  NCBI Gene: 102636129
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:118838690-118838958 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 59.81 cM

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650492	pseudogene	Chr2:118838636-118839142 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011835	pseudogene	Chr2:121734153-121734421 (+)
A/J	MGP_AJ_G0011828	pseudogene	Chr2:116779809-116780077 (+)
AKR/J	MGP_AKRJ_G0011796	pseudogene	Chr2:120049543-120049811 (+)
BALB/cJ	MGP_BALBcJ_G0011806	pseudogene	Chr2:117043727-117043995 (+)
C3H/HeJ	MGP_C3HHeJ_G0011691	pseudogene	Chr2:120519230-120519498 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012108	pseudogene	Chr2:125730279-125730547 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010596	pseudogene	Chr2:111830720-111830988 (+)
CAST/EiJ	MGP_CASTEiJ_G0011478	pseudogene	Chr2:120822052-120822320 (+)
CBA/J	MGP_CBAJ_G0011666	pseudogene	Chr2:130163389-130163657 (+)
DBA/2J	MGP_DBA2J_G0011721	pseudogene	Chr2:116209125-116209393 (+)
FVB/NJ	MGP_FVBNJ_G0011722	pseudogene	Chr2:115026767-115027035 (+)
LP/J	MGP_LPJ_G0011786	pseudogene	Chr2:122046642-122046910 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011726	pseudogene	Chr2:134528106-134528374 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012103	pseudogene	Chr2:120174619-120174887 (+)
PWK/PhJ	MGP_PWKPhJ_G0011326	pseudogene	Chr2:115761137-115761405 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011147	pseudogene	Chr2:119354601-119354860 (+)
WSB/EiJ	MGP_WSBEiJ_G0011501	pseudogene	Chr2:121003593-121003861 (+)

Homology

• Gene Tree
  Uqcrh-ps2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Uqcrh-ps2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081413 (Evidence)
• NCBI Gene
  102636129

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081413	Ensembl Gene Model | MGI Sequence Detail	269	C57BL/6J
transcript	ENSMUST00000121613	Ensembl | MGI Sequence Detail	269	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Uqcrh-ps2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr19596	Chr2:118838613-118838630 (+)	-68 bp