Gm14023 Gene Detail

Summary

• Symbol
  Gm14023
• Name
  predicted gene 14023

• Feature Type
  lncRNA gene
• IDs
  MGI:3650639
  NCBI Gene: 100503468
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr2:129139290-129149746 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 62.90 cM

Strain
Comparison

• SNPs within 2kb
  280 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650639	lncRNA gene	Chr2:129139285-129149746 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015470	unclassified non-coding RNA gene	Chr2:132678239-132690117 (+)
A/J	MGP_AJ_G0015446	unclassified non-coding RNA gene	Chr2:127304890-127315294 (+)
AKR/J	MGP_AKRJ_G0015410	unclassified non-coding RNA gene	Chr2:130920818-130931447 (+)
BALB/cJ	MGP_BALBcJ_G0015409	unclassified non-coding RNA gene	Chr2:127571275-127581924 (+)
C3H/HeJ	MGP_C3HHeJ_G0015232	unclassified non-coding RNA gene	Chr2:131432344-131442952 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015863	unclassified non-coding RNA gene	Chr2:136830882-136841328 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013602	unclassified non-coding RNA gene	Chr2:122124278-122135048 (+)
CAST/EiJ	MGP_CASTEiJ_G0014784	unclassified non-coding RNA gene	Chr2:131684144-131697491 (+)
CBA/J	MGP_CBAJ_G0015213	unclassified non-coding RNA gene	Chr2:141895489-141906101 (+)
DBA/2J	MGP_DBA2J_G0015307	unclassified non-coding RNA gene	Chr2:126695821-126706351 (+)
FVB/NJ	MGP_FVBNJ_G0015314	unclassified non-coding RNA gene	Chr2:125341332-125352725 (+)
LP/J	MGP_LPJ_G0015385	unclassified non-coding RNA gene	Chr2:132923819-132934438 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015338	unclassified non-coding RNA gene	Chr2:145784550-145796232 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015903	unclassified non-coding RNA gene	Chr2:130955232-130965682 (+)
PWK/PhJ	MGP_PWKPhJ_G0014572	unclassified non-coding RNA gene	Chr2:126279211-126289687 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014360	unclassified non-coding RNA gene	Chr2:130081644-130092021 (+)
WSB/EiJ	MGP_WSBEiJ_G0014891	unclassified non-coding RNA gene	Chr2:131879943-131891883 (+)

Homology

• Gene Tree
  Gm14023
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm14023
• Incidental Mutations
  APF
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000085498 (Evidence)
• NCBI Gene
  100503468

Representative Sequences			Length	Strain/Species
genomic	100503468	NCBI Gene Model | MGI Sequence Detail	10457	C57BL/6J
transcript	NR_040371	RefSeq | MGI Sequence Detail	1781	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm14023:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20110	Chr2:129139281-129139296 (+)	-1 bp
Tssr20111	Chr2:129142353-129142364 (+)	3,069 bp