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Gm13490 Gene Detail
Summary
  • Symbol
    Gm13490
  • Name
    predicted gene 13490
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650821
    NCBI Gene: 433426
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:51546978-51622021 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 29.96 cM
Strain
Comparison
more
  • SNPs within 2kb
    2485 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650821
 lncRNA gene Chr2:51546978-51622021 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005915
 lincRNA gene Chr2:50933084-51012242 (-)
A/J MGP_AJ_G0005908
 lincRNA gene Chr2:48987870-49060163 (-)
AKR/J MGP_AKRJ_G0005883
 lincRNA gene Chr2:50391489-50471414 (-)
BALB/cJ MGP_BALBcJ_G0005887
 lincRNA gene Chr2:49079367-49155863 (-)
C3H/HeJ MGP_C3HHeJ_G0005834
 lincRNA gene Chr2:50375970-50456048 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006047
 lincRNA gene Chr2:52430005-52513556 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005381
 lincRNA gene Chr2:46979050-47046641 (-)
CAST/EiJ MGP_CASTEiJ_G0005770
 lincRNA gene Chr2:50472954-50545502 (-)
CBA/J MGP_CBAJ_G0005819
 lincRNA gene Chr2:54410968-54494732 (-)
DBA/2J MGP_DBA2J_G0005840
 lincRNA gene Chr2:48626990-48696743 (-)
FVB/NJ MGP_FVBNJ_G0005866
 lincRNA gene Chr2:48325715-48396995 (-)
LP/J MGP_LPJ_G0005919
 lincRNA gene Chr2:50825924-50901257 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005853
 lincRNA gene Chr2:55490792-55574604 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006044
 lincRNA gene Chr2:50278725-50355573 (-)
PWK/PhJ MGP_PWKPhJ_G0005719
 lincRNA gene Chr2:48498960-48569720 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005631
 lincRNA gene Chr2:50501282-50583767 (-)
WSB/EiJ MGP_WSBEiJ_G0005823
 lincRNA gene Chr2:50575654-50655665 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 433426 NCBI Gene Model | MGI Sequence Detail 75044 C57BL/6J ±  kb
transcript NR_040639 RefSeq | MGI Sequence Detail 2409 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory