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Gm12678 Gene Detail
Summary
  • Symbol
    Gm12678
  • Name
    predicted gene 12678
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650923
    NCBI Gene: 102632657
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:44943733-44949133 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 23.63 cM
Strain
Comparison
more
  • SNPs within 2kb
    291 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650923
 lncRNA gene Chr4:44943697-44949133 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006416
 lincRNA gene Chr4:43145978-43153793 (+)
A/J MGP_AJ_G0006408
 lincRNA gene Chr4:41605871-41610620 (+)
AKR/J MGP_AKRJ_G0006382
 lincRNA gene Chr4:42594928-42602245 (+)
BALB/cJ MGP_BALBcJ_G0006382
 lincRNA gene Chr4:41690730-41694990 (+)
C3H/HeJ MGP_C3HHeJ_G0006332
 lincRNA gene Chr4:43197745-43204643 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006548
 lincRNA gene Chr4:44784504-44791766 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005835
 lincRNA gene Chr4:39005090-39010433 (+)
CAST/EiJ MGP_CASTEiJ_G0006266
 lincRNA gene Chr4:42743638-42750832 (+)
CBA/J MGP_CBAJ_G0006315
 lincRNA gene Chr4:46155400-46166690 (+)
DBA/2J MGP_DBA2J_G0006337
 lincRNA gene Chr4:41504678-41509451 (+)
FVB/NJ MGP_FVBNJ_G0006359
 lincRNA gene Chr4:40728504-40733078 (+)
LP/J MGP_LPJ_G0006418
 lincRNA gene Chr4:43207604-43212137 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006346
 lincRNA gene Chr4:49323913-49328454 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006552
 lincRNA gene Chr4:42803978-42808441 (+)
PWK/PhJ MGP_PWKPhJ_G0006202
 lincRNA gene Chr4:41560568-41565259 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006115
 lincRNA gene Chr4:42325785-42330297 (+)
WSB/EiJ MGP_WSBEiJ_G0006311
 lincRNA gene Chr4:42684944-42689467 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    715
  • Tissues
    8
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 102632657 NCBI Gene Model | MGI Sequence Detail 5401 C57BL/6J ±  kb
transcript NR_166576 RefSeq | MGI Sequence Detail 1515 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Primer pair 1
References
more
  • Summaries
    All 9
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:263878 Aboudehen K, et al., Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. J Biol Chem. 2018 Jun 15;293(24):9388-9398
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory