Gm11656 Gene Detail

Summary

• Symbol
  Gm11656
• Name
  predicted gene 11656

• Feature Type
  lncRNA gene
• IDs
  MGI:3651000
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:108268703-108271919 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 71.82 cM

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651000	lncRNA gene	Chr11:108268703-108271919 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036899	sense intronic lncRNA gene	Chr11:111847894-111852094 (+)
A/J	MGP_AJ_G0036887	sense intronic lncRNA gene	Chr11:107033041-107037213 (+)
AKR/J	MGP_AKRJ_G0036834	sense intronic lncRNA gene	Chr11:110236775-110239965 (+)
BALB/cJ	MGP_BALBcJ_G0036878	sense intronic lncRNA gene	Chr11:107464457-107467669 (+)
C3H/HeJ	MGP_C3HHeJ_G0036563	sense intronic lncRNA gene	Chr11:110551762-110554989 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037391	sense intronic lncRNA gene	Chr11:115253631-115256825 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034451	sense intronic lncRNA gene	Chr11:104298130-104301263 (+)
CAST/EiJ	MGP_CASTEiJ_G0035752	sense intronic lncRNA gene	Chr11:111659258-111664324 (+)
CBA/J	MGP_CBAJ_G0036538	sense intronic lncRNA gene	Chr11:120037544-120040760 (+)
DBA/2J	MGP_DBA2J_G0036715	sense intronic lncRNA gene	Chr11:106511496-106514712 (+)
FVB/NJ	MGP_FVBNJ_G0036666	sense intronic lncRNA gene	Chr11:106018465-106021667 (+)
LP/J	MGP_LPJ_G0036761	sense intronic lncRNA gene	Chr11:112280775-112284008 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036672	sense intronic lncRNA gene	Chr11:119216019-119220115 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037507	sense intronic lncRNA gene	Chr11:110801481-110805804 (+)
PWK/PhJ	MGP_PWKPhJ_G0035446	sense intronic lncRNA gene	Chr11:107670361-107673598 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035257	sense intronic lncRNA gene	Chr11:110551274-110554511 (+)
WSB/EiJ	MGP_WSBEiJ_G0035952	sense intronic lncRNA gene	Chr11:110736100-110739330 (+)

Homology

• Gene Tree
  Gm11656
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000084916 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084916	Ensembl Gene Model | MGI Sequence Detail	3217	C57BL/6J
transcript	ENSMUST00000137462	Ensembl | MGI Sequence Detail	395	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;