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Calr-ps Pseudogene Detail
Summary
  • Symbol
    Calr-ps
  • Name
    calreticulin, pseudogene
  • Synonyms
    Gm14078
  • Feature Type
    pseudogene
  • IDs
    MGI:3651104
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:140797685-140798169 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 69.51 cM
Strain
Comparison
more
  • SNPs within 2kb
    136 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651104
 pseudogene Chr2:140797685-140798169 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011886
 pseudogene Chr2:144909528-144910012 (-)
A/J MGP_AJ_G0011878
 pseudogene Chr2:139021135-139021619 (-)
AKR/J MGP_AKRJ_G0011845
 pseudogene Chr2:143020032-143020516 (-)
BALB/cJ MGP_BALBcJ_G0011855
 pseudogene Chr2:139465463-139465947 (-)
C3H/HeJ MGP_C3HHeJ_G0011738
 pseudogene Chr2:143552048-143552532 (-)
C57BL/6NJ MGP_C57BL6NJ_G0012157
 pseudogene Chr2:149270457-149270941 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0010636
 pseudogene Chr2:133348184-133348836 (-)
CAST/EiJ MGP_CASTEiJ_G0011527
 pseudogene Chr2:143870894-143871384 (-)
CBA/J MGP_CBAJ_G0011713
 pseudogene Chr2:154714472-154714956 (-)
DBA/2J MGP_DBA2J_G0011769
 pseudogene Chr2:138383928-138384414 (-)
FVB/NJ MGP_FVBNJ_G0011771
 pseudogene Chr2:136926439-136926923 (-)
LP/J MGP_LPJ_G0011834
 pseudogene Chr2:145057509-145057993 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011776
 pseudogene Chr2:158856626-158857112 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0012154
 pseudogene Chr2:143019398-143019884 (-)
PWK/PhJ MGP_PWKPhJ_G0011373
 pseudogene Chr2:137980276-137980762 (-)
SPRET/EiJ MGP_SPRETEiJ_G0011190
 pseudogene Chr2:142087658-142088152 (-)
WSB/EiJ MGP_WSBEiJ_G0011544
 pseudogene Chr2:144005785-144006271 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Calr-ps
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081731 Ensembl Gene Model | MGI Sequence Detail 485 C57BL/6J ±  kb
transcript ENSMUST00000121776 Ensembl | MGI Sequence Detail 485 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 3
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory