Rbmx2-ps Pseudogene Detail

Summary

• Symbol
  Rbmx2-ps
• Name
  RNA binding motif protein, X-linked 2, pseudogene
• Synonyms
  Gm14081

• Feature Type
  pseudogene
• IDs
  MGI:3651105
  NCBI Gene: 668914
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:142418848-142419777 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 70.62 cM

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651105	pseudogene	Chr2:142418762-142419974 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011889	pseudogene	Chr2:146571827-146572756 (+)
A/J	MGP_AJ_G0011881	pseudogene	Chr2:140622410-140623339 (+)
AKR/J	MGP_AKRJ_G0011848	pseudogene	Chr2:144691297-144692226 (+)
BALB/cJ	MGP_BALBcJ_G0011858	pseudogene	Chr2:141078477-141099061 (+)
C3H/HeJ	MGP_C3HHeJ_G0011741	pseudogene	Chr2:145231232-145232161 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012160	pseudogene	Chr2:150977964-150978893 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011716	pseudogene	Chr2:156512486-156513415 (+)
DBA/2J	MGP_DBA2J_G0011772	pseudogene	Chr2:139976694-139977653 (+)
FVB/NJ	MGP_FVBNJ_G0011774	pseudogene	Chr2:138532594-138533523 (+)
LP/J	MGP_LPJ_G0011837	pseudogene	Chr2:146746253-146747182 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011779	pseudogene	Chr2:160728854-160729783 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012157	pseudogene	Chr2:144699901-144700860 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0011193	pseudogene	Chr2:143744730-143745668 (+)
WSB/EiJ	MGP_WSBEiJ_G0011547	pseudogene	Chr2:145685553-145687699 (+)

Homology

• Gene Tree
  Rbmx2-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Rbmx2-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000083215 (Evidence)
• NCBI Gene
  668914

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083215	Ensembl Gene Model | MGI Sequence Detail	930	C57BL/6J
transcript	ENSMUST00000119377	Ensembl | MGI Sequence Detail	930	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Rbmx2-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20496	Chr2:142418817-142418832 (+)	-23 bp