Gm14244 Gene Detail

Summary

• Symbol
  Gm14244
• Name
  predicted gene 14244

• Feature Type
  lncRNA gene
• IDs
  MGI:3651251
  NCBI Gene: 102641286
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr2:127533774-127541974 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 62.08 cM

Strain
Comparison

• SNPs within 2kb
  264 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651251	lncRNA gene	Chr2:127533774-127542408 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003631	antisense lncRNA gene	Chr2:130979589-130988033 (+)
A/J	MGP_AJ_G0003613	antisense lncRNA gene	Chr2:125680646-125689877 (+)
AKR/J	MGP_AKRJ_G0003591	antisense lncRNA gene	Chr2:129275737-129285638 (+)
BALB/cJ	MGP_BALBcJ_G0003602	antisense lncRNA gene	Chr2:125947727-125956604 (+)
C3H/HeJ	MGP_C3HHeJ_G0003549	antisense lncRNA gene	Chr2:129776514-129785380 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003741	antisense lncRNA gene	Chr2:135091756-135100330 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003249	antisense lncRNA gene	Chr2:120518691-120527751 (+)
CAST/EiJ	MGP_CASTEiJ_G0003512	antisense lncRNA gene	Chr2:129980680-129989411 (+)
CBA/J	MGP_CBAJ_G0003546	antisense lncRNA gene	Chr2:140093987-140102776 (+)
DBA/2J	MGP_DBA2J_G0003554	antisense lncRNA gene	Chr2:125082734-125091394 (+)
FVB/NJ	MGP_FVBNJ_G0003574	antisense lncRNA gene	Chr2:123737167-123748012 (+)
LP/J	MGP_LPJ_G0003631	antisense lncRNA gene	Chr2:131231239-131240405 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003562	antisense lncRNA gene	Chr2:144109025-144119039 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003742	antisense lncRNA gene	Chr2:129288404-129297752 (+)
PWK/PhJ	MGP_PWKPhJ_G0003467	antisense lncRNA gene	Chr2:124635241-124644283 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003410	antisense lncRNA gene	Chr2:128373867-128384326 (+)
WSB/EiJ	MGP_WSBEiJ_G0003546	antisense lncRNA gene	Chr2:130192883-130201400 (+)

Homology

• Gene Tree
  Gm14244
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm14244
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  65
• RefSeq
  2

• Ensembl
  ENSMUSG00000087162 (Evidence)
• NCBI Gene
  102641286

Representative Sequences			Length	Strain/Species
genomic	102641286	NCBI Gene Model | MGI Sequence Detail	8201	C57BL/6J
transcript	NR_166171	RefSeq | MGI Sequence Detail	2024	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm14244:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr20029	Chr2:127533751-127533762 (+)	-17 bp
Tssr20030	Chr2:127533766-127533798 (+)	8 bp
Tssr20031	Chr2:127533813-127533826 (+)	46 bp
Tssr20032	Chr2:127537777-127537795 (+)	4,012 bp
Tssr20033	Chr2:127537818-127537823 (+)	4,047 bp