Gm12327 Pseudogene Detail

Summary

• Symbol
  Gm12327
• Name
  predicted gene 12327

• Feature Type
  pseudogene
• IDs
  MGI:3651321
  NCBI Gene: 100416838
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:73533486-73535410 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 45.48 cM

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651321	pseudogene	Chr11:73532612-73535981 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039975	pseudogene	Chr11:74334610-74339034 (+)
A/J	MGP_AJ_G0039982	pseudogene	Chr11:71583193-71588386 (+)
AKR/J	MGP_AKRJ_G0039902	pseudogene	Chr11:73734764-73737953 (+)
BALB/cJ	MGP_BALBcJ_G0039960	pseudogene	Chr11:71855043-71859076 (+)
C3H/HeJ	MGP_C3HHeJ_G0039607	pseudogene	Chr11:73722135-73725424 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040540	pseudogene	Chr11:76616980-76622866 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038715	pseudogene	Chr11:74099357-74105496 (+)
CBA/J	MGP_CBAJ_G0039576	pseudogene	Chr11:79964047-79967229 (+)
DBA/2J	MGP_DBA2J_G0039773	pseudogene	Chr11:71177619-71180849 (+)
FVB/NJ	MGP_FVBNJ_G0039737	pseudogene	Chr11:70722673-70725948 (+)
LP/J	MGP_LPJ_G0039809	pseudogene	Chr11:74853016-74856308 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0040635	pseudogene	Chr11:73964614-73968514 (+)
PWK/PhJ	MGP_PWKPhJ_G0038393	pseudogene	Chr11:71867466-71870790 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038937	pseudogene	Chr11:73724841-73731811 (+)

Homology

• Gene Tree
  Gm12327
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12327
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000082338 (Evidence)
• NCBI Gene
  100416838

Representative Sequences			Length	Strain/Species
genomic	100416838	NCBI Gene Model | MGI Sequence Detail	1925	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6