Gm14200 Pseudogene Detail

Summary

• Symbol
  Gm14200
• Name
  predicted gene 14200

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3651374
  NCBI Gene: 115489487
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:158310089-158310280 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 78.72 cM

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651374	pseudogene	Chr2:158309673-158310310 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011951	pseudogene	Chr2:163544592-163544794 (-)
A/J	MGP_AJ_G0011947	pseudogene	Chr2:156983152-156983343 (-)
AKR/J	MGP_AKRJ_G0011912	pseudogene	Chr2:161608464-161608655 (-)
BALB/cJ	MGP_BALBcJ_G0011924	pseudogene	Chr2:157288486-157288677 (-)
C3H/HeJ	MGP_C3HHeJ_G0011803	pseudogene	Chr2:161955319-161955510 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012221	pseudogene	Chr2:168423047-168423238 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011777	pseudogene	Chr2:174455667-174455858 (-)
DBA/2J	MGP_DBA2J_G0011830	pseudogene	Chr2:156159729-156159920 (-)
FVB/NJ	MGP_FVBNJ_G0011838	pseudogene	Chr2:154569467-154569658 (-)
LP/J	MGP_LPJ_G0011898	pseudogene	Chr2:163636265-163636456 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011837	pseudogene	Chr2:178246480-178246671 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012224	pseudogene	Chr2:161440285-161440476 (-)
PWK/PhJ	MGP_PWKPhJ_G0011438	pseudogene	Chr2:155694274-155694465 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010646	pseudogene	Chr16:29479361-29479551 (-)
WSB/EiJ	MGP_WSBEiJ_G0011609	pseudogene	Chr2:162334023-162334214 (-)

Homology

• Gene Tree
  Gm14200
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  2

• Ensembl
  ENSMUSG00000081800 (Evidence)
• NCBI Gene
  115489487

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081800	Ensembl Gene Model | MGI Sequence Detail	192	C57BL/6J
transcript	ENSMUST00000122256	Ensembl | MGI Sequence Detail	192	Not Applicable
polypeptide	XP_036018670	RefSeq | MGI Sequence Detail	82	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;