Gm12583 Pseudogene Detail

Summary

• Symbol
  Gm12583
• Name
  predicted gene 12583

• Feature Type
  pseudogene
• IDs
  MGI:3651485
  NCBI Gene: 100416060
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:37162323-37163175 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 18.30 cM

Strain
Comparison

• SNPs within 2kb
  1 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651485	pseudogene	Chr3:37162233-37163475 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0012091	pseudogene	Chr3:34258055-34258908 (+)
AKR/J	MGP_AKRJ_G0012052	pseudogene	Chr3:34894262-34895115 (+)
BALB/cJ	MGP_BALBcJ_G0012067	pseudogene	Chr3:34008483-34009335 (+)
C3H/HeJ	MGP_C3HHeJ_G0011945	pseudogene	Chr3:34951248-34952207 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012374	pseudogene	Chr3:36584148-36585000 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011918	pseudogene	Chr3:37565269-37566122 (+)
DBA/2J	MGP_DBA2J_G0011972	pseudogene	Chr3:33695981-33696834 (+)
FVB/NJ	MGP_FVBNJ_G0011980	pseudogene	Chr3:33138568-33139420 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0011982	pseudogene	Chr3:40035705-40036558 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012383	pseudogene	Chr3:34746333-34747186 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm12583
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Gm12583
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15
• RefSeq
  1

• Ensembl
  ENSMUSG00000082878 (Evidence)
• NCBI Gene
  100416060

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082878	Ensembl Gene Model | MGI Sequence Detail	853	C57BL/6J
transcript	ENSMUST00000120677	Ensembl | MGI Sequence Detail	853	Not Applicable

References

• Summaries
  All 12

  Diseases 1

  Phenotypes 7
• Earliest
  J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426