Gm12482 Pseudogene Detail

Summary

• Symbol
  Gm12482
• Name
  predicted gene 12482

• Feature Type
  pseudogene
• IDs
  MGI:3651627
  NCBI Gene: 666761
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:52821488-52822117 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 28.57 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651627	pseudogene	Chr4:52821453-52822242 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012656	pseudogene	Chr4:51424625-51426987 (+)
A/J	MGP_AJ_G0012645	pseudogene	Chr4:49454925-49455554 (+)
AKR/J	MGP_AKRJ_G0012615	pseudogene	Chr4:50810711-50811340 (+)
BALB/cJ	MGP_BALBcJ_G0012628	pseudogene	Chr4:49631344-49631973 (+)
C3H/HeJ	MGP_C3HHeJ_G0012488	pseudogene	Chr4:51361711-51362999 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012953	pseudogene	Chr4:53330832-53332730 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009181	pseudogene	Chr1:76190954-76191620 (+)
CAST/EiJ	MGP_CASTEiJ_G0009957	pseudogene	Chr1:82998834-82999968 (+)
CBA/J	MGP_CBAJ_G0012468	pseudogene	Chr4:55156198-55159084 (+)
DBA/2J	MGP_DBA2J_G0012526	pseudogene	Chr4:49429649-49430278 (+)
FVB/NJ	MGP_FVBNJ_G0012526	pseudogene	Chr4:48664909-48666461 (+)
LP/J	MGP_LPJ_G0012597	pseudogene	Chr4:51535778-51536407 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012534	pseudogene	Chr4:58382327-58382956 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012957	pseudogene	Chr4:51040780-51041409 (+)
PWK/PhJ	MGP_PWKPhJ_G0009860	pseudogene	Chr1:79654324-79654957 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009674	pseudogene	Chr1:82497396-82498038 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm12482
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000081975 (Evidence)
• NCBI Gene
  666761

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081975	Ensembl Gene Model | MGI Sequence Detail	630	C57BL/6J
transcript	ENSMUST00000120435	Ensembl | MGI Sequence Detail	630	Not Applicable

Other
Accession IDs

MGI:3779793

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;