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Gm12670 Gene Detail
Summary
  • Symbol
    Gm12670
  • Name
    predicted gene 12670
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3651682
    NCBI Gene: 97177
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:91534552-91539389 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 43.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    218 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651682
 lncRNA gene Chr4:91534552-91539389 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006462
 lincRNA gene Chr4:91633182-91637930 (+)
A/J MGP_AJ_G0006454
 lincRNA gene Chr4:88418586-88423467 (+)
AKR/J MGP_AKRJ_G0006428
 lincRNA gene Chr4:90575748-90580600 (+)
BALB/cJ MGP_BALBcJ_G0006428
 lincRNA gene Chr4:88694615-88699459 (+)
C3H/HeJ MGP_C3HHeJ_G0006378
 lincRNA gene Chr4:91389944-91394775 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006594
 lincRNA gene Chr4:95119556-95124385 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005878
 lincRNA gene Chr4:84137004-84141750 (+)
CAST/EiJ MGP_CASTEiJ_G0006311
 lincRNA gene Chr4:89220353-89225525 (+)
CBA/J MGP_CBAJ_G0006361
 lincRNA gene Chr4:98010640-98015541 (+)
DBA/2J MGP_DBA2J_G0006383
 lincRNA gene Chr4:88180786-88185627 (+)
FVB/NJ MGP_FVBNJ_G0006405
 lincRNA gene Chr4:87081752-87086585 (+)
LP/J MGP_LPJ_G0006464
 lincRNA gene Chr4:91925794-91930556 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006392
 lincRNA gene Chr4:103223855-103228741 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006598
 lincRNA gene Chr4:90777376-90782194 (+)
PWK/PhJ MGP_PWKPhJ_G0006248
 lincRNA gene Chr4:86425983-86430786 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006160
 lincRNA gene Chr4:88251221-88255993 (+)
WSB/EiJ MGP_WSBEiJ_G0006357
 lincRNA gene Chr4:90974364-90979190 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Genomic Mutations
    4 involving Gm12670
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    22
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086042 Ensembl Gene Model | MGI Sequence Detail 4838 C57BL/6J ±  kb
transcript ENSMUST00000123606 Ensembl | MGI Sequence Detail 576 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
Other
Accession IDs
less
MGI:2140698, MGI:2140707
References
more
  • Summaries
    All 14
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory