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Gm12927 Gene Detail
Summary
  • Symbol
    Gm12927
  • Name
    predicted gene 12927
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3651776
    NCBI Gene: 102639193
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:119109719-119114172 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 55.34 cM
Strain
Comparison
more
  • SNPs within 2kb
    261 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3651776
 lncRNA gene Chr4:119109716-119114172 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003949
 antisense lncRNA gene Chr4:120436548-120440983 (-)
A/J MGP_AJ_G0003930
 antisense lncRNA gene Chr4:115706042-115710434 (-)
AKR/J MGP_AKRJ_G0003907
 antisense lncRNA gene Chr4:118216290-118220707 (-)
BALB/cJ MGP_BALBcJ_G0003916
 antisense lncRNA gene Chr4:116323671-116328079 (-)
C3H/HeJ MGP_C3HHeJ_G0003863
 antisense lncRNA gene Chr4:119782041-119786459 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004064
 antisense lncRNA gene Chr4:125006697-125011150 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003552
 antisense lncRNA gene Chr4:109807281-109811672 (-)
CAST/EiJ MGP_CASTEiJ_G0003826
 antisense lncRNA gene Chr4:117105168-117109585 (-)
CBA/J MGP_CBAJ_G0003856
 antisense lncRNA gene Chr4:128392955-128397371 (-)
DBA/2J MGP_DBA2J_G0003872
 antisense lncRNA gene Chr4:116298069-116302465 (-)
FVB/NJ MGP_FVBNJ_G0003891
 antisense lncRNA gene Chr4:114811539-114815961 (-)
LP/J MGP_LPJ_G0003952
 antisense lncRNA gene Chr4:120554200-120558635 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003879
 antisense lncRNA gene Chr4:133260190-133264608 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004059
 antisense lncRNA gene Chr4:119290910-119295355 (-)
PWK/PhJ MGP_PWKPhJ_G0003780
 antisense lncRNA gene Chr4:113219618-113224314 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003726
 antisense lncRNA gene Chr4:115713146-115717531 (-)
WSB/EiJ MGP_WSBEiJ_G0003862
 antisense lncRNA gene Chr4:119293789-119298246 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    57
  • Chemically induced (other)
    2
  • Gene trapped
    53
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Gm12927
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085203 Ensembl Gene Model | MGI Sequence Detail 4454 C57BL/6J ±  kb
transcript ENSMUST00000150252 Ensembl | MGI Sequence Detail 373 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 14
    Phenotypes 8
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory