Gm11732 Gene Detail

Summary

• Symbol
  Gm11732
• Name
  predicted gene 11732

• Feature Type
  lncRNA gene
• IDs
  MGI:3652087
  NCBI Gene: 102637448
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:117316989-117329576 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 82.96 cM

Strain
Comparison

• SNPs within 2kb
  542 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3652087	lncRNA gene	Chr11:117316989-117329692 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015220	unclassified non-coding RNA gene	Chr11:121665826-121681668 (+)
A/J	MGP_AJ_G0015194	unclassified non-coding RNA gene	Chr11:116277454-116290488 (+)
AKR/J	MGP_AKRJ_G0015157	unclassified non-coding RNA gene	Chr11:119827413-119840102 (+)
BALB/cJ	MGP_BALBcJ_G0015156	unclassified non-coding RNA gene	Chr11:116658795-116671494 (+)
C3H/HeJ	MGP_C3HHeJ_G0014980	unclassified non-coding RNA gene	Chr11:120104481-120117155 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015613	unclassified non-coding RNA gene	Chr11:125389861-125402539 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013355	unclassified non-coding RNA gene	Chr11:113297932-113310753 (+)
CAST/EiJ	MGP_CASTEiJ_G0014533	unclassified non-coding RNA gene	Chr11:121526565-121546749 (+)
CBA/J	MGP_CBAJ_G0014959	unclassified non-coding RNA gene	Chr11:130313833-130331061 (+)
DBA/2J	MGP_DBA2J_G0015052	unclassified non-coding RNA gene	Chr11:115681627-115694319 (+)
FVB/NJ	MGP_FVBNJ_G0015063	unclassified non-coding RNA gene	Chr11:115301082-115314350 (+)
LP/J	MGP_LPJ_G0015133	unclassified non-coding RNA gene	Chr11:122004914-122020144 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015090	unclassified non-coding RNA gene	Chr11:129317376-129331300 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015652	unclassified non-coding RNA gene	Chr11:120470329-120484434 (+)
PWK/PhJ	MGP_PWKPhJ_G0014325	unclassified non-coding RNA gene	Chr11:117041634-117055032 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014112	unclassified non-coding RNA gene	Chr11:120196406-120210183 (+)
WSB/EiJ	MGP_WSBEiJ_G0014636	unclassified non-coding RNA gene	Chr11:120430834-120443520 (+)

Homology

• Gene Tree
  Gm11732
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  2

• Ensembl
  ENSMUSG00000085336 (Evidence)
• NCBI Gene
  102637448

Representative Sequences			Length	Strain/Species
genomic	102637448	NCBI Gene Model | MGI Sequence Detail	12588	C57BL/6J
transcript	NR_166733	RefSeq | MGI Sequence Detail	1641	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm11732:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr106061	Chr11:117317028-117317038 (+)	44 bp