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Gm13855 Gene Detail
Summary
  • Symbol
    Gm13855
  • Name
    predicted gene 13855
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3652198
    NCBI Gene: 105242626
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:34153992-34156312 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 14.76 cM
Strain
Comparison
more
  • SNPs within 2kb
    205 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3652198
 lncRNA gene Chr6:34153992-34163327 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006935
 lincRNA gene Chr6:32242016-32249177 (+)
A/J MGP_AJ_G0006929
 lincRNA gene Chr6:30872521-30879995 (+)
AKR/J MGP_AKRJ_G0006899
 lincRNA gene Chr6:31898387-31905550 (+)
BALB/cJ MGP_BALBcJ_G0006905
 lincRNA gene Chr6:31053356-31060517 (+)
C3H/HeJ MGP_C3HHeJ_G0006850
 lincRNA gene Chr6:31870807-31877962 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007070
 lincRNA gene Chr6:33057897-33065046 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006767
 lincRNA gene Chr6:31672171-31679385 (+)
CBA/J MGP_CBAJ_G0006832
 lincRNA gene Chr6:34331793-34338950 (+)
DBA/2J MGP_DBA2J_G0006852
 lincRNA gene Chr6:30747884-30755043 (+)
FVB/NJ MGP_FVBNJ_G0006875
 lincRNA gene Chr6:30530460-30537628 (+)
LP/J MGP_LPJ_G0006935
 lincRNA gene Chr6:32369855-32376981 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006856
 lincRNA gene Chr6:36689899-36697052 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007072
 lincRNA gene Chr6:31791678-31798831 (+)
PWK/PhJ MGP_PWKPhJ_G0006709
 lincRNA gene Chr6:30350699-30360391 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006617
 lincRNA gene Chr6:31426743-31435896 (+)
WSB/EiJ MGP_WSBEiJ_G0006822
 lincRNA gene Chr6:31704294-31711459 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    715
  • Tissues
    8
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 105242626 NCBI Gene Model | MGI Sequence Detail 2321 C57BL/6J ±  kb
transcript XR_868963 RefSeq | MGI Sequence Detail 423 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Primer pair 1
References
more
  • Summaries
    All 7
    Developmental Gene Expression 1
  • Earliest
    J:263878 Aboudehen K, et al., Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. J Biol Chem. 2018 Jun 15;293(24):9388-9398
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
08/02/2024
MGI 6.24 		The Jackson Laboratory