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1700112J05Rik Gene Detail
Summary
  • Symbol
    1700112J05Rik
  • Name
    RIKEN cDNA 1700112J05 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3696786
    NCBI Gene: 68246
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:77154296-77166710 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 41.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    292 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3696786
 lncRNA gene Chr5:77154289-77166710 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006679
 lincRNA gene Chr5:77223214-77235619 (-)
A/J MGP_AJ_G0006673
 lincRNA gene Chr5:74269576-74282032 (-)
AKR/J MGP_AKRJ_G0006643
 lincRNA gene Chr5:76692885-76709117 (-)
BALB/cJ MGP_BALBcJ_G0006648
 lincRNA gene Chr5:75005847-75018255 (-)
C3H/HeJ MGP_C3HHeJ_G0006594
 lincRNA gene Chr5:77066517-77078975 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006813
 lincRNA gene Chr5:80314140-80326545 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006072
 lincRNA gene Chr5:69899311-69913663 (-)
CAST/EiJ MGP_CASTEiJ_G0006517
 lincRNA gene Chr5:76275092-76289765 (-)
CBA/J MGP_CBAJ_G0006575
 lincRNA gene Chr5:82956941-82969373 (-)
DBA/2J MGP_DBA2J_G0006595
 lincRNA gene Chr5:74334392-74346848 (-)
FVB/NJ MGP_FVBNJ_G0006620
 lincRNA gene Chr5:73530253-73542681 (-)
LP/J MGP_LPJ_G0006680
 lincRNA gene Chr5:77660324-77672730 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006604
 lincRNA gene Chr5:86087518-86100410 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006815
 lincRNA gene Chr5:76244922-76257335 (-)
PWK/PhJ MGP_PWKPhJ_G0006456
 lincRNA gene Chr5:73347020-73359939 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006363
 lincRNA gene Chr5:75601058-75616462 (-)
WSB/EiJ MGP_WSBEiJ_G0006568
 lincRNA gene Chr5:76575489-76587914 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086632 Ensembl Gene Model | MGI Sequence Detail 12415 C57BL/6J ±  kb
transcript ENSMUST00000129353 Ensembl | MGI Sequence Detail 793 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Phenotypes 4
  • Earliest
    J:9 Castle WE, et al., Linkage Interrelations of Three Genes for Rex (Short) Coat in the Rabbit. Proc Natl Acad Sci U S A. 1933 Dec;19(12):1006-11
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory