A330040F15Rik Gene Detail

Summary

• Symbol
  A330040F15Rik
• Name
  RIKEN cDNA A330040F15 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3698434
  NCBI Gene: 74333
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:12563232-12573930 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 8.72 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  300 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3698434	lncRNA gene	Chr19:12495279-12573930 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015383	unclassified non-coding RNA gene	Chr19:10059144-10069794 (-)
A/J	MGP_AJ_G0015358	unclassified non-coding RNA gene	Chr19:9418220-9427098 (-)
AKR/J	MGP_AKRJ_G0015322	unclassified non-coding RNA gene	Chr19:9893057-9903731 (-)
BALB/cJ	MGP_BALBcJ_G0015322	unclassified non-coding RNA gene	Chr19:9420265-9429143 (-)
C3H/HeJ	MGP_C3HHeJ_G0015146	unclassified non-coding RNA gene	Chr19:9778489-9789155 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015776	unclassified non-coding RNA gene	Chr19:10610045-10622418 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013517	unclassified non-coding RNA gene	Chr19:10046911-10057629 (-)
CAST/EiJ	MGP_CASTEiJ_G0014697	unclassified non-coding RNA gene	Chr19:9342372-9351224 (-)
CBA/J	MGP_CBAJ_G0015125	unclassified non-coding RNA gene	Chr19:10689922-10700568 (-)
DBA/2J	MGP_DBA2J_G0015220	unclassified non-coding RNA gene	Chr19:9474199-9485096 (-)
FVB/NJ	MGP_FVBNJ_G0015227	unclassified non-coding RNA gene	Chr19:9482457-9493992 (-)
LP/J	MGP_LPJ_G0015300	unclassified non-coding RNA gene	Chr19:10137427-10148095 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015253	unclassified non-coding RNA gene	Chr19:10465607-10474485 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015815	unclassified non-coding RNA gene	Chr19:9870412-9881769 (-)
PWK/PhJ	MGP_PWKPhJ_G0014487	unclassified non-coding RNA gene	Chr19:8924076-8935164 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014274	unclassified non-coding RNA gene	Chr19:9021853-9033517 (-)
WSB/EiJ	MGP_WSBEiJ_G0014804	unclassified non-coding RNA gene	Chr19:9727861-9738987 (-)

Homology

• Gene Tree
  A330040F15Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000086213 (Evidence)
• NCBI Gene
  74333

Representative Sequences			Length	Strain/Species
genomic	74333	NCBI Gene Model | MGI Sequence Detail	10699	C57BL/6J
transcript	NR_015503	RefSeq | MGI Sequence Detail	1106	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 7
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;