Mageb16-ps2 Pseudogene Detail

Summary

• Symbol
  Mageb16-ps2
• Name
  MAGE family member B16, pseudogene 2
• Synonyms
  EG625863

• Feature Type
  pseudogene
• IDs
  MGI:3701602
  NCBI Gene: 625863
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:60746951-60748043 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 29.16 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3701602	pseudogene	Chr6:60746503-60748164 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014898	pseudogene	ChrX:142111836-142112966 (-)
A/J	MGP_AJ_G0014890	pseudogene	ChrX:141429750-141431147 (-)
AKR/J	MGP_AKRJ_G0013429	pseudogene	Chr6:59788316-59790284 (-)
BALB/cJ	MGP_BALBcJ_G0014847	pseudogene	ChrX:139674841-139675971 (-)
C3H/HeJ	MGP_C3HHeJ_G0014682	pseudogene	ChrX:142228027-142229157 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015331	pseudogene	ChrX:146130571-146131701 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012722	pseudogene	ChrX:75111182-75112274 (-)
CAST/EiJ	MGP_CASTEiJ_G0014297	pseudogene	ChrX:122866796-122867923 (-)
CBA/J	MGP_CBAJ_G0014672	pseudogene	ChrX:150633506-150634636 (-)
DBA/2J	MGP_DBA2J_G0014754	pseudogene	ChrX:140518158-140519288 (-)
FVB/NJ	MGP_FVBNJ_G0013342	pseudogene	Chr6:57142228-57143479 (-)
LP/J	MGP_LPJ_G0014852	pseudogene	ChrX:143075185-143076315 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0015316	pseudogene	ChrX:141425196-141426326 (-)
PWK/PhJ	MGP_PWKPhJ_G0013776	pseudogene	ChrX:59174539-59175631 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013881	pseudogene	ChrX:123427833-123428964 (-)
WSB/EiJ	MGP_WSBEiJ_G0013044	pseudogene	Chr6:59965679-59967041 (-)

Homology

• Gene Tree
  Mageb16-ps2
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000107755 (Evidence)
• NCBI Gene
  625863

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107755	Ensembl Gene Model | MGI Sequence Detail	1093	C57BL/6J
transcript	ENSMUST00000204513	Ensembl | MGI Sequence Detail	1093	Not Applicable

Other
Accession IDs

MGI:3647446

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;