Gm13725 Pseudogene Detail

Summary

• Symbol
  Gm13725
• Name
  predicted gene 13725

• Feature Type
  pseudogene
• IDs
  MGI:3702114
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:29963643-29963849 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 12.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3702114	pseudogene	Chr6:29963643-29963849 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013399	pseudogene	Chr6:27803859-27804065 (+)
A/J	MGP_AJ_G0013383	pseudogene	Chr6:26622389-26622595 (+)
AKR/J	MGP_AKRJ_G0013346	pseudogene	Chr6:27495977-27496183 (+)
BALB/cJ	MGP_BALBcJ_G0013361	pseudogene	Chr6:26780254-26780460 (+)
C3H/HeJ	MGP_C3HHeJ_G0013212	pseudogene	Chr6:27503786-27503992 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013741	pseudogene	Chr6:28589603-28589809 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011848	pseudogene	Chr6:24824954-24825160 (+)
CAST/EiJ	MGP_CASTEiJ_G0012922	pseudogene	Chr6:27303568-27303774 (+)
CBA/J	MGP_CBAJ_G0013179	pseudogene	Chr6:29673108-29673314 (+)
DBA/2J	MGP_DBA2J_G0013263	pseudogene	Chr6:26557389-26557595 (+)
FVB/NJ	MGP_FVBNJ_G0013260	pseudogene	Chr6:26315115-26315321 (+)
LP/J	MGP_LPJ_G0013330	pseudogene	Chr6:27941784-27941990 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013277	pseudogene	Chr6:32155579-32155785 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013738	pseudogene	Chr6:27381039-27381245 (+)
PWK/PhJ	MGP_PWKPhJ_G0012735	pseudogene	Chr6:26115888-26116094 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012517	pseudogene	Chr6:27108961-27109167 (+)
WSB/EiJ	MGP_WSBEiJ_G0012964	pseudogene	Chr6:27343781-27343987 (+)

Homology

• Gene Tree
  Gm13725
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083961 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083961	Ensembl Gene Model | MGI Sequence Detail	207	C57BL/6J
transcript	ENSMUST00000122139	Ensembl | MGI Sequence Detail	207	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;