Gm14220 Pseudogene Detail

Summary

• Symbol
  Gm14220
• Name
  predicted gene 14220

• Feature Type
  pseudogene
• IDs
  MGI:3702164
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:159820194-159820642 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 80.64 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3702164	pseudogene	Chr2:159820194-159820642 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039699	pseudogene	Chr2:165132774-165133221 (+)
A/J	MGP_AJ_G0039697	pseudogene	Chr2:158503171-158503618 (+)
AKR/J	MGP_AKRJ_G0039623	pseudogene	Chr2:163171697-163172144 (+)
BALB/cJ	MGP_BALBcJ_G0039667	pseudogene	Chr2:158816396-158816843 (+)
C3H/HeJ	MGP_C3HHeJ_G0039329	pseudogene	Chr2:163528469-163528916 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040228	pseudogene	Chr2:170015612-170016060 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038450	pseudogene	Chr2:163879511-163879958 (+)
CBA/J	MGP_CBAJ_G0039300	pseudogene	Chr2:176143383-176143830 (+)
DBA/2J	MGP_DBA2J_G0039494	pseudogene	Chr2:157683527-157683974 (+)
FVB/NJ	MGP_FVBNJ_G0039452	pseudogene	Chr2:156090377-156090824 (+)
LP/J	MGP_LPJ_G0039533	pseudogene	Chr2:165240085-165240532 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039454	pseudogene	Chr2:179883860-179884307 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040329	pseudogene	Chr2:163024703-163025150 (+)
PWK/PhJ	MGP_PWKPhJ_G0038126	pseudogene	Chr2:157218028-157218475 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037875	pseudogene	Chr2:161907538-161907986 (+)
WSB/EiJ	MGP_WSBEiJ_G0038683	pseudogene	Chr2:163921818-163922265 (+)

Homology

• Gene Tree
  Gm14220
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000083329 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083329	Ensembl Gene Model | MGI Sequence Detail	449	C57BL/6J
transcript	ENSMUST00000118114	Ensembl | MGI Sequence Detail	449	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;